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  5. Brara.A01411.1

Brara.A01411.1


Description : transcription factor *(DOF)


Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.A01411.1
Cluster HCAA Clusters: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
A4A49_12086 No alias cyclic dof factor 2 0.03 Orthogroups_2024-Update
A4A49_16781 No alias dof zinc finger protein dof4.6 0.05 Orthogroups_2024-Update
A4A49_38012 No alias dof zinc finger protein dof5.1 0.03 Orthogroups_2024-Update
At1g21340 No alias Dof zinc finger protein DOF1.2... 0.03 Orthogroups_2024-Update
At1g47655 No alias Dof zinc finger protein DOF1.6... 0.03 Orthogroups_2024-Update
At2g37590 No alias Dof zinc finger protein DOF2.4... 0.03 Orthogroups_2024-Update
At2g46590 No alias Dof zinc finger protein DOF2.5... 0.02 Orthogroups_2024-Update
At3g50410 No alias OBP1 [Source:UniProtKB/TrEMBL;Acc:A0A178VFT5] 0.06 Orthogroups_2024-Update
Bradi2g09720 No alias cycling DOF factor 2 0.02 Orthogroups_2024-Update
Brara.G01458.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Brara.H02152.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Brara.I00633.1 No alias transcription factor *(DOF) 0.04 Orthogroups_2024-Update
GRMZM2G146283 No alias TARGET OF MONOPTEROS 6 0.04 Orthogroups_2024-Update
Glyma.16G145000 No alias OBF binding protein 1 0.02 Orthogroups_2024-Update
HORVU7Hr1G043250.2 No alias transcription factor *(DOF) 0.04 Orthogroups_2024-Update
PSME_00004776-RA No alias (at5g60850 : 127.0) Encodes a zinc finger protein.; OBF... 0.02 Orthogroups_2024-Update
Potri.004G121800 No alias cycling DOF factor 2 0.02 Orthogroups_2024-Update
Potri.005G134200 No alias TARGET OF MONOPTEROS 6 0.03 Orthogroups_2024-Update
Seita.9G033400.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Seita.9G259300.1 No alias transcription factor *(DOF) 0.04 Orthogroups_2024-Update
Sobic.009G014400.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
Solyc02g067230 No alias Dof zinc finger protein3 0.02 Orthogroups_2024-Update
Solyc02g088070 No alias Dof zinc finger protein (AHRD V3.3 *** W9QEV1_9ROSA) 0.03 Orthogroups_2024-Update
Solyc03g115940 No alias Dof zinc finger protein (AHRD V3.3 *** C4B6D7_IPOBA) 0.03 Orthogroups_2024-Update
Solyc05g007880 No alias Dof zinc finger protein (AHRD V3.3 *** W9S8B0_9ROSA) 0.02 Orthogroups_2024-Update
Solyc06g069760 No alias Dof zinc finger protein 22 0.02 Orthogroups_2024-Update
Solyc10g086440 No alias Dof zinc finger protein (AHRD V3.3 *** W9S882_9ROSA) 0.04 Orthogroups_2024-Update
Sopen02g023480 No alias Dof domain, zinc finger 0.03 Orthogroups_2024-Update
Sopen06g027770 No alias Dof domain, zinc finger 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
BP GO:0006355 regulation of transcription, DNA-templated IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0004176 ATP-dependent peptidase activity IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
CC GO:0005886 plasma membrane IEP Predicted GO
MF GO:0042623 ATPase activity, coupled IEP Predicted GO
InterPro domains Description Start Stop
IPR003851 Znf_Dof 52 109
No external refs found!