1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.A01566.1

Brara.A01566.1


Description : carotenoid beta ring hydroxylase


Gene families : OG_42_0002239 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002239_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.A01566.1
Cluster HCAA Clusters: Cluster_207

Target Alias Description ECC score Gene Family Method Actions
A4A49_26103 No alias beta-carotene hydroxylase 2, chloroplastic 0.07 Orthogroups_2024-Update
At4g25700 No alias Beta-carotene 3-hydroxylase 1, chloroplastic... 0.04 Orthogroups_2024-Update
At5g52570 No alias Beta-carotene 3-hydroxylase 2, chloroplastic... 0.07 Orthogroups_2024-Update
Bradi5g19130 No alias beta-hydroxylase 1 0.03 Orthogroups_2024-Update
Cre04.g215050 No alias beta-hydroxylase 1 0.01 Orthogroups_2024-Update
Glyma.09G132200 No alias beta-hydroxylase 1 0.04 Orthogroups_2024-Update
Glyma.16G179100 No alias beta-hydroxylase 1 0.05 Orthogroups_2024-Update
LOC_Os04g48880 No alias fatty acid hydroxylase, putative, expressed 0.05 Orthogroups_2024-Update
Mp2g08670.1 No alias carotenoid beta ring hydroxylase 0.03 Orthogroups_2024-Update
Potri.017G145700 No alias beta-hydroxylase 1 0.04 Orthogroups_2024-Update
Pp1s19_96V6 No alias beta-carotene hydroxylase 0.03 Orthogroups_2024-Update
Pp1s20_24V6 No alias beta-carotene hydroxylase 0.02 Orthogroups_2024-Update
Seita.9G559200.1 No alias carotenoid beta ring hydroxylase 0.02 Orthogroups_2024-Update
Solyc06g036260 No alias beta-carotene hydroxylase-1 0.07 Orthogroups_2024-Update
Sopen06g012040 No alias Fatty acid hydroxylase superfamily 0.04 Orthogroups_2024-Update
evm.model.tig00001187.17 No alias (at5g52570 : 113.0) Converts β-carotene to... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEA 16Dec
BP GO:0008610 lipid biosynthetic process IEA 16Dec
MF GO:0016491 oxidoreductase activity IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
BP GO:0003333 amino acid transmembrane transport IEP Predicted GO
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Predicted GO
MF GO:0004096 catalase activity IEP Predicted GO
MF GO:0004180 carboxypeptidase activity IEP Predicted GO
MF GO:0004185 serine-type carboxypeptidase activity IEP Predicted GO
MF GO:0004564 beta-fructofuranosidase activity IEP Predicted GO
MF GO:0004594 pantothenate kinase activity IEP Predicted GO
CC GO:0005875 microtubule associated complex IEP Predicted GO
BP GO:0006595 polyamine metabolic process IEP Predicted GO
BP GO:0006596 polyamine biosynthetic process IEP Predicted GO
BP GO:0006597 spermine biosynthetic process IEP Predicted GO
BP GO:0006865 amino acid transport IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0008215 spermine metabolic process IEP Predicted GO
BP GO:0008216 spermidine metabolic process IEP Predicted GO
MF GO:0008238 exopeptidase activity IEP Predicted GO
BP GO:0008295 spermidine biosynthetic process IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
BP GO:0015936 coenzyme A metabolic process IEP Predicted GO
BP GO:0015937 coenzyme A biosynthetic process IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
BP GO:0017006 protein-tetrapyrrole linkage IEP Predicted GO
BP GO:0017007 protein-bilin linkage IEP Predicted GO
BP GO:0017009 protein-phycocyanobilin linkage IEP Predicted GO
CC GO:0030286 dynein complex IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033866 nucleoside bisphosphate biosynthetic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034030 ribonucleoside bisphosphate biosynthetic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034033 purine nucleoside bisphosphate biosynthetic process IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
MF GO:0070008 serine-type exopeptidase activity IEP Predicted GO
BP GO:0097164 ammonium ion metabolic process IEP Predicted GO
BP GO:0098656 anion transmembrane transport IEP Predicted GO
BP GO:1903825 organic acid transmembrane transport IEP Predicted GO
BP GO:1905039 carboxylic acid transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR006694 Fatty_acid_hydroxylase 147 274
No external refs found!