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Description : component *(eS10) of small ribosomal-subunit (SSU) proteome
Gene families : OG_42_0001576 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001576_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa: Brara.A01568.1 | |
| Cluster | HCAA Clusters: Cluster_10 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 37555 | No alias | RNA binding Plectin/S10 domain-containing protein | 0.18 | Orthogroups_2024-Update | |
| A4A49_36949 | No alias | 40s ribosomal protein s10-3 | 0.16 | Orthogroups_2024-Update | |
| A4A49_64300 | No alias | 40s ribosomal protein s10-3 | 0.22 | Orthogroups_2024-Update | |
| At5g52650 | No alias | 40S ribosomal protein S10-3... | 0.05 | Orthogroups_2024-Update | |
| Bradi2g61560 | No alias | RNA binding Plectin/S10 domain-containing protein | 0.17 | Orthogroups_2024-Update | |
| Bradi3g43060 | No alias | RNA binding Plectin/S10 domain-containing protein | 0.23 | Orthogroups_2024-Update | |
| Brara.C01425.1 | No alias | component *(eS10) of small ribosomal-subunit (SSU) proteome | 0.28 | Orthogroups_2024-Update | |
| Brara.G01517.1 | No alias | component *(eS10) of small ribosomal-subunit (SSU) proteome | 0.07 | Orthogroups_2024-Update | |
| Brara.K00178.1 | No alias | component *(eS10) of small ribosomal-subunit (SSU) proteome | 0.1 | Orthogroups_2024-Update | |
| Cre09.g411100 | No alias | RNA binding Plectin/S10 domain-containing protein | 0.18 | Orthogroups_2024-Update | |
| GRMZM2G171484 | No alias | RNA binding Plectin/S10 domain-containing protein | 0.18 | Orthogroups_2024-Update | |
| Glyma.01G222100 | No alias | RNA binding Plectin/S10 domain-containing protein | 0.23 | Orthogroups_2024-Update | |
| Glyma.05G211100 | No alias | RNA binding Plectin/S10 domain-containing protein | 0.04 | Orthogroups_2024-Update | |
| Glyma.08G017500 | No alias | RNA binding Plectin/S10 domain-containing protein | 0.05 | Orthogroups_2024-Update | |
| Glyma.11G021700 | No alias | RNA binding Plectin/S10 domain-containing protein | 0.16 | Orthogroups_2024-Update | |
| HORVU0Hr1G004700.1 | No alias | component *(eS10) of small ribosomal-subunit (SSU) proteome | 0.18 | Orthogroups_2024-Update | |
| HORVU3Hr1G111760.2 | No alias | component *(eS10) of small ribosomal-subunit (SSU) proteome | 0.22 | Orthogroups_2024-Update | |
| Kfl01159_0030 | kfl01159_0030_v1.1 | (q9ayp4|rs10_orysa : 213.0) 40S ribosomal protein S10 -... | 0.03 | Orthogroups_2024-Update | |
| LOC_Os04g35090 | No alias | 40S ribosomal protein S10, putative, expressed | 0.07 | Orthogroups_2024-Update | |
| MA_111018g0010 | No alias | (q9ayp4|rs10_orysa : 184.0) 40S ribosomal protein S10 -... | 0.06 | Orthogroups_2024-Update | |
| MA_314020g0010 | No alias | (q9ayp4|rs10_orysa : 182.0) 40S ribosomal protein S10 -... | 0.09 | Orthogroups_2024-Update | |
| Mp2g00580.1 | No alias | component RPS10 of SSU proteome | 0.04 | Orthogroups_2024-Update | |
| PSME_00025508-RA | No alias | (q9ayp4|rs10_orysa : 181.0) 40S ribosomal protein S10 -... | 0.13 | Orthogroups_2024-Update | |
| PSME_00031081-RA | No alias | (q9ayp4|rs10_orysa : 170.0) 40S ribosomal protein S10 -... | 0.08 | Orthogroups_2024-Update | |
| Potri.004G073500 | No alias | RNA binding Plectin/S10 domain-containing protein | 0.14 | Orthogroups_2024-Update | |
| Potri.013G027900 | No alias | RNA binding Plectin/S10 domain-containing protein | 0.14 | Orthogroups_2024-Update | |
| Pp1s18_236V6 | No alias | 40s ribosomal protein s10 | 0.05 | Orthogroups_2024-Update | |
| Pp1s255_28V6 | No alias | 40s ribosomal protein s10 | 0.17 | Orthogroups_2024-Update | |
| Pp1s281_7V6 | No alias | 40s ribosomal protein s10 | 0.27 | Orthogroups_2024-Update | |
| Pp1s427_37V6 | No alias | 40s ribosomal protein s10 | 0.24 | Orthogroups_2024-Update | |
| Pp1s43_46V6 | No alias | 40s ribosomal protein s10 | 0.32 | Orthogroups_2024-Update | |
| Seita.5G462400.1 | No alias | component *(eS10) of small ribosomal-subunit (SSU) proteome | 0.14 | Orthogroups_2024-Update | |
| Seita.7G099000.1 | No alias | component *(eS10) of small ribosomal-subunit (SSU) proteome | 0.23 | Orthogroups_2024-Update | |
| Sobic.003G436700.1 | No alias | component *(eS10) of small ribosomal-subunit (SSU) proteome | 0.19 | Orthogroups_2024-Update | |
| Sobic.006G081100.1 | No alias | component *(eS10) of small ribosomal-subunit (SSU) proteome | 0.35 | Orthogroups_2024-Update | |
| Solyc01g099670 | No alias | meloidogyne-induced giant cell protein db212 | 0.2 | Orthogroups_2024-Update | |
| Solyc12g096540 | No alias | 40S ribosomal protein S10-like (AHRD V3.3 *** Q2XPV4_SOLTU) | 0.03 | Orthogroups_2024-Update | |
| Sopen01g043180 | No alias | Plectin/S10 domain | 0.35 | Orthogroups_2024-Update | |
| Sopen12g032370 | No alias | Plectin/S10 domain | 0.28 | Orthogroups_2024-Update | |
| evm.model.contig_636.5 | No alias | (q9ayp4|rs10_orysa : 95.9) 40S ribosomal protein S10 -... | 0.39 | Orthogroups_2024-Update | |
| evm.model.tig00001164.5 | No alias | (original description: no original description) | 0.23 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0001882 | nucleoside binding | IEP | Predicted GO |
| MF | GO:0001883 | purine nucleoside binding | IEP | Predicted GO |
| MF | GO:0003674 | molecular_function | IEP | Predicted GO |
| MF | GO:0003723 | RNA binding | IEP | Predicted GO |
| MF | GO:0003735 | structural constituent of ribosome | IEP | Predicted GO |
| MF | GO:0003924 | GTPase activity | IEP | Predicted GO |
| MF | GO:0004017 | adenylate kinase activity | IEP | Predicted GO |
| MF | GO:0004018 | N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity | IEP | Predicted GO |
| MF | GO:0005198 | structural molecule activity | IEP | Predicted GO |
| MF | GO:0005525 | GTP binding | IEP | Predicted GO |
| CC | GO:0005575 | cellular_component | IEP | Predicted GO |
| CC | GO:0005840 | ribosome | IEP | Predicted GO |
| BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | Predicted GO |
| BP | GO:0006188 | IMP biosynthetic process | IEP | Predicted GO |
| BP | GO:0006412 | translation | IEP | Predicted GO |
| BP | GO:0006518 | peptide metabolic process | IEP | Predicted GO |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Predicted GO |
| BP | GO:0008150 | biological_process | IEP | Predicted GO |
| BP | GO:0008152 | metabolic process | IEP | Predicted GO |
| BP | GO:0009058 | biosynthetic process | IEP | Predicted GO |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Predicted GO |
| BP | GO:0009123 | nucleoside monophosphate metabolic process | IEP | Predicted GO |
| BP | GO:0009124 | nucleoside monophosphate biosynthetic process | IEP | Predicted GO |
| BP | GO:0009126 | purine nucleoside monophosphate metabolic process | IEP | Predicted GO |
| BP | GO:0009127 | purine nucleoside monophosphate biosynthetic process | IEP | Predicted GO |
| BP | GO:0009150 | purine ribonucleotide metabolic process | IEP | Predicted GO |
| BP | GO:0009152 | purine ribonucleotide biosynthetic process | IEP | Predicted GO |
| BP | GO:0009156 | ribonucleoside monophosphate biosynthetic process | IEP | Predicted GO |
| BP | GO:0009161 | ribonucleoside monophosphate metabolic process | IEP | Predicted GO |
| BP | GO:0009167 | purine ribonucleoside monophosphate metabolic process | IEP | Predicted GO |
| BP | GO:0009168 | purine ribonucleoside monophosphate biosynthetic process | IEP | Predicted GO |
| BP | GO:0009259 | ribonucleotide metabolic process | IEP | Predicted GO |
| BP | GO:0009260 | ribonucleotide biosynthetic process | IEP | Predicted GO |
| BP | GO:0009987 | cellular process | IEP | Predicted GO |
| MF | GO:0016776 | phosphotransferase activity, phosphate group as acceptor | IEP | Predicted GO |
| MF | GO:0016842 | amidine-lyase activity | IEP | Predicted GO |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | Predicted GO |
| MF | GO:0019205 | nucleobase-containing compound kinase activity | IEP | Predicted GO |
| BP | GO:0019538 | protein metabolic process | IEP | Predicted GO |
| MF | GO:0019843 | rRNA binding | IEP | Predicted GO |
| MF | GO:0032549 | ribonucleoside binding | IEP | Predicted GO |
| MF | GO:0032550 | purine ribonucleoside binding | IEP | Predicted GO |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Predicted GO |
| CC | GO:0032991 | protein-containing complex | IEP | Predicted GO |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Predicted GO |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Predicted GO |
| BP | GO:0043043 | peptide biosynthetic process | IEP | Predicted GO |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Predicted GO |
| CC | GO:0043226 | organelle | IEP | Predicted GO |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | Predicted GO |
| CC | GO:0043229 | intracellular organelle | IEP | Predicted GO |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Predicted GO |
| BP | GO:0043603 | cellular amide metabolic process | IEP | Predicted GO |
| BP | GO:0043604 | amide biosynthetic process | IEP | Predicted GO |
| BP | GO:0044237 | cellular metabolic process | IEP | Predicted GO |
| BP | GO:0044238 | primary metabolic process | IEP | Predicted GO |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Predicted GO |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Predicted GO |
| BP | GO:0044267 | cellular protein metabolic process | IEP | Predicted GO |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Predicted GO |
| CC | GO:0044424 | intracellular part | IEP | Predicted GO |
| CC | GO:0044444 | cytoplasmic part | IEP | Predicted GO |
| CC | GO:0044464 | cell part | IEP | Predicted GO |
| BP | GO:0046040 | IMP metabolic process | IEP | Predicted GO |
| BP | GO:0046390 | ribose phosphate biosynthetic process | IEP | Predicted GO |
| MF | GO:0050145 | nucleoside monophosphate kinase activity | IEP | Predicted GO |
| BP | GO:0071704 | organic substance metabolic process | IEP | Predicted GO |
| BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | Predicted GO |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Predicted GO |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Predicted GO |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Predicted GO |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR005326 | S10_plectin_N | 4 | 95 |
| No external refs found! |