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  5. Brara.A01595.1

Brara.A01595.1


Description : regulatory protein *(PEP) of autonomous floral-promotion pathway


Gene families : OG_42_0000691 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000691_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.A01595.1

Target Alias Description ECC score Gene Family Method Actions
MA_427202g0010 No alias (at3g04610 : 100.0) flowering locus KH domain (FLK);... 0.02 Orthogroups_2024-Update
PSME_00010462-RA No alias (at3g04610 : 115.0) flowering locus KH domain (FLK);... 0.03 Orthogroups_2024-Update
PSME_00014736-RA No alias (at3g04610 : 140.0) flowering locus KH domain (FLK);... 0.03 Orthogroups_2024-Update
PSME_00040942-RA No alias (at4g26000 : 130.0) Encodes a novel Arabidopsis gene... 0.04 Orthogroups_2024-Update
PSME_00045265-RA No alias (at3g04610 : 116.0) flowering locus KH domain (FLK);... 0.03 Orthogroups_2024-Update
PSME_00052527-RA No alias (at3g04610 : 127.0) flowering locus KH domain (FLK);... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP Predicted GO
CC GO:0005759 mitochondrial matrix IEP Predicted GO
BP GO:0006099 tricarboxylic acid cycle IEP Predicted GO
BP GO:0006101 citrate metabolic process IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
BP GO:0009606 tropism IEP Predicted GO
BP GO:0010274 hydrotropism IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Predicted GO
BP GO:0016999 antibiotic metabolic process IEP Predicted GO
MF GO:0030570 pectate lyase activity IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 142 208
IPR004088 KH_dom_type_1 306 363
IPR004088 KH_dom_type_1 51 103
No external refs found!