Brara.A01665.1

Description : nucleotide exchange factor *(MGE)

Gene families : OG_42_0003392 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003392_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.A01665.1
Cluster	HCAA Clusters: Cluster_24

Target	Alias	Description	ECC score	Gene Family Method
At4g26780	No alias	GrpE protein homolog 2, mitochondrial...	0.06	Orthogroups_2024-Update
Glyma.18G090400	No alias	Co-chaperone GrpE family protein	0.03	Orthogroups_2024-Update
HORVU5Hr1G053680.3	No alias	nucleotide exchange factor *(MGE)	0.03	Orthogroups_2024-Update
LOC_Os08g25090	No alias	co-chaperone GrpE protein, putative, expressed	0.02	Orthogroups_2024-Update
MA_315276g0010	No alias	(at4g26780 : 197.0) unknown function; AR192; FUNCTIONS...	0.02	Orthogroups_2024-Update
PSME_00029258-RA	No alias	(at4g26780 : 206.0) unknown function; AR192; FUNCTIONS...	0.02	Orthogroups_2024-Update
Seita.6G116700.1	No alias	nucleotide exchange factor *(MGE)	0.03	Orthogroups_2024-Update
evm.model.tig00001086.6	No alias	(at4g26780 : 119.0) unknown function; AR192; FUNCTIONS...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0000774	adenyl-nucleotide exchange factor activity	IEA	16Dec
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
BP	GO:0006457	protein folding	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030234	enzyme regulator activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042802	identical protein binding	None	Extended
MF	GO:0042803	protein homodimerization activity	IEA	16Dec
MF	GO:0046983	protein dimerization activity	None	Extended
MF	GO:0051087	chaperone binding	IEA	16Dec
MF	GO:0060589	nucleoside-triphosphatase regulator activity	None	Extended
MF	GO:0060590	ATPase regulator activity	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0098772	molecular function regulator	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	Predicted GO
MF	GO:0003723	RNA binding	IEP	Predicted GO
MF	GO:0005509	calcium ion binding	IEP	Predicted GO
CC	GO:0005783	endoplasmic reticulum	IEP	Predicted GO
BP	GO:0006396	RNA processing	IEP	Predicted GO
MF	GO:0008173	RNA methyltransferase activity	IEP	Predicted GO
BP	GO:0016070	RNA metabolic process	IEP	Predicted GO
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	IEP	Predicted GO
MF	GO:0016887	ATPase activity	IEP	Predicted GO
MF	GO:0019843	rRNA binding	IEP	Predicted GO
BP	GO:0034660	ncRNA metabolic process	IEP	Predicted GO
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Predicted GO
MF	GO:0051082	unfolded protein binding	IEP	Predicted GO
BP	GO:0090304	nucleic acid metabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000740	GrpE	145	311

External Links

No external refs found!