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  5. Brara.A01668.1

Brara.A01668.1


Description : Unknown function


Gene families : OG_42_0000976 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000976_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.A01668.1
Cluster HCAA Clusters: Cluster_136

Target Alias Description ECC score Gene Family Method Actions
Bradi1g07880 No alias SWIB/MDM2 domain superfamily protein 0.02 Orthogroups_2024-Update
Glyma.08G321900 No alias SWIB/MDM2 domain superfamily protein 0.03 Orthogroups_2024-Update
HORVU5Hr1G049660.2 No alias Unknown function 0.03 Orthogroups_2024-Update
MA_10428393g0010 No alias (at4g26810 : 110.0) SWIB/MDM2 domain superfamily... 0.03 Orthogroups_2024-Update
evm.model.contig_4447.8 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0009892 negative regulation of metabolic process IEP Predicted GO
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
InterPro domains Description Start Stop
IPR003121 SWIB_MDM2_domain 24 95
No external refs found!