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  5. Brara.A01707.1

Brara.A01707.1


Description : class VIII myosin microfilament-based motor protein


Gene families : OG_42_0000130 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000130_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.A01707.1
Cluster HCAA Clusters: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
A4A49_08498 No alias myosin-2 0.03 Orthogroups_2024-Update
A4A49_30732 No alias myosin-2 0.04 Orthogroups_2024-Update
A4A49_61020 No alias myosin-15 0.04 Orthogroups_2024-Update
At1g04600 No alias Myosin-7 [Source:UniProtKB/Swiss-Prot;Acc:F4I5Q6] 0.05 Orthogroups_2024-Update
Brara.I01717.1 No alias class XI myosin microfilament-based motor protein 0.03 Orthogroups_2024-Update
Brara.I05507.1 No alias class XI myosin microfilament-based motor protein 0.04 Orthogroups_2024-Update
LOC_Os01g40200 No alias XIK, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00022093-RA No alias (at1g17580 : 308.0) Encodes a member of the type XI... 0.03 Orthogroups_2024-Update
PSME_00028363-RA No alias (at5g20490 : 238.0) Encodes a member of the type XI... 0.05 Orthogroups_2024-Update
Sopen07g020410 No alias DIL domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEA 16Dec
MF GO:0005515 protein binding IEA 16Dec
MF GO:0005524 ATP binding IEA 16Dec
CC GO:0016459 myosin complex IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Predicted GO
MF GO:0005319 lipid transporter activity IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
BP GO:0006869 lipid transport IEP Predicted GO
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
BP GO:0061024 membrane organization IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
BP GO:0120009 intermembrane lipid transfer IEP Predicted GO
MF GO:0120013 intermembrane lipid transfer activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000048 IQ_motif_EF-hand-BS 836 854
IPR000048 IQ_motif_EF-hand-BS 872 891
IPR001609 Myosin_head_motor_dom 146 797
No external refs found!