Brara.A01710.1

Description : subfamily ABCG transporter

Gene families : OG_42_0000429 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000429_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.A01710.1
Cluster	HCAA Clusters: Cluster_401

Target	Alias	Description	ECC score	Gene Family Method
At1g71960	No alias	ABC transporter G family member 25...	0.03	Orthogroups_2024-Update
Brara.B01985.1	No alias	subfamily ABCG transporter	0.03	Orthogroups_2024-Update
Potri.006G199500	No alias	ABC-2 type transporter family protein	0.03	Orthogroups_2024-Update
Pp1s169_25V6	No alias	white-brown-complex abc transporter family	0.02	Orthogroups_2024-Update
Pp1s270_82V6	No alias	white-brown-complex abc transporter family	0.03	Orthogroups_2024-Update
Solyc07g065770	No alias	ABC transporter family protein (AHRD V3.3 - B9GG01_POPTR)	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	16Dec
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0008144	drug binding	None	Extended
CC	GO:0016020	membrane	IEA	16Dec
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000226	microtubule cytoskeleton organization	IEP	Predicted GO
MF	GO:0004559	alpha-mannosidase activity	IEP	Predicted GO
MF	GO:0004867	serine-type endopeptidase inhibitor activity	IEP	Predicted GO
BP	GO:0006013	mannose metabolic process	IEP	Predicted GO
BP	GO:0007051	spindle organization	IEP	Predicted GO
BP	GO:0009611	response to wounding	IEP	Predicted GO
BP	GO:0010038	response to metal ion	IEP	Predicted GO
MF	GO:0015923	mannosidase activity	IEP	Predicted GO
MF	GO:0016670	oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor	IEP	Predicted GO
MF	GO:0016755	transferase activity, transferring amino-acyl groups	IEP	Predicted GO
MF	GO:0016756	glutathione gamma-glutamylcysteinyltransferase activity	IEP	Predicted GO
MF	GO:0016972	thiol oxidase activity	IEP	Predicted GO
BP	GO:0019748	secondary metabolic process	IEP	Predicted GO
BP	GO:0022402	cell cycle process	IEP	Predicted GO
BP	GO:0031023	microtubule organizing center organization	IEP	Predicted GO
BP	GO:0044550	secondary metabolite biosynthetic process	IEP	Predicted GO
BP	GO:0046937	phytochelatin metabolic process	IEP	Predicted GO
BP	GO:0046938	phytochelatin biosynthetic process	IEP	Predicted GO
BP	GO:0051225	spindle assembly	IEP	Predicted GO
MF	GO:0051920	peroxiredoxin activity	IEP	Predicted GO
BP	GO:0070925	organelle assembly	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR013525	ABC_2_trans	369	573
IPR003439	ABC_transporter-like	68	221

External Links

No external refs found!