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  5. Brara.A01713.1

Brara.A01713.1


Description : regulatory protein *(TVA) of cellulose synthase complex trafficking


Gene families : OG_42_0000690 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000690_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.A01713.1
Cluster HCAA Clusters: Cluster_290

Target Alias Description ECC score Gene Family Method Actions
A4A49_14612 No alias hypothetical protein 0.03 Orthogroups_2024-Update
Bradi1g28490 No alias Protein of unknown function (DUF1218) 0.02 Orthogroups_2024-Update
GRMZM2G147418 No alias Protein of unknown function (DUF1218) 0.03 Orthogroups_2024-Update
GRMZM2G360615 No alias Protein of unknown function (DUF1218) 0.03 Orthogroups_2024-Update
Glyma.07G193800 No alias Protein of unknown function (DUF1218) 0.04 Orthogroups_2024-Update
LOC_Os08g16130 No alias fiber protein Fb34, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os09g10910 No alias fiber protein Fb34, putative, expressed 0.02 Orthogroups_2024-Update
MA_10429894g0010 No alias (at1g52910 : 197.0) Protein of unknown function... 0.04 Orthogroups_2024-Update
Potri.001G403600 No alias Protein of unknown function (DUF1218) 0.04 Orthogroups_2024-Update
Seita.3G015100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.001G206400.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Predicted GO
CC GO:0000152 nuclear ubiquitin ligase complex IEP Predicted GO
CC GO:0005680 anaphase-promoting complex IEP Predicted GO
BP GO:0007088 regulation of mitotic nuclear division IEP Predicted GO
BP GO:0007346 regulation of mitotic cell cycle IEP Predicted GO
MF GO:0008198 ferrous iron binding IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
BP GO:0010564 regulation of cell cycle process IEP Predicted GO
BP GO:0010965 regulation of mitotic sister chromatid separation IEP Predicted GO
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Predicted GO
MF GO:0015020 glucuronosyltransferase activity IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
BP GO:0030071 regulation of mitotic metaphase/anaphase transition IEP Predicted GO
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Predicted GO
BP GO:0033043 regulation of organelle organization IEP Predicted GO
BP GO:0033044 regulation of chromosome organization IEP Predicted GO
BP GO:0033045 regulation of sister chromatid segregation IEP Predicted GO
BP GO:0033047 regulation of mitotic sister chromatid segregation IEP Predicted GO
BP GO:0051128 regulation of cellular component organization IEP Predicted GO
BP GO:0051726 regulation of cell cycle IEP Predicted GO
BP GO:0051783 regulation of nuclear division IEP Predicted GO
BP GO:0051983 regulation of chromosome segregation IEP Predicted GO
BP GO:0090231 regulation of spindle checkpoint IEP Predicted GO
BP GO:0090266 regulation of mitotic cell cycle spindle assembly checkpoint IEP Predicted GO
BP GO:1901976 regulation of cell cycle checkpoint IEP Predicted GO
BP GO:1901987 regulation of cell cycle phase transition IEP Predicted GO
BP GO:1901990 regulation of mitotic cell cycle phase transition IEP Predicted GO
BP GO:1902099 regulation of metaphase/anaphase transition of cell cycle IEP Predicted GO
BP GO:1903504 regulation of mitotic spindle checkpoint IEP Predicted GO
BP GO:1905818 regulation of chromosome separation IEP Predicted GO
InterPro domains Description Start Stop
IPR009606 DUF1218 58 152
No external refs found!