Brara.A01769.1

Description : transcription factor *(CRF) & subgroup ERF-VI transcription factor

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.A01769.1
Cluster	HCAA Clusters: Cluster_223

Target	Alias	Description	ECC score	Gene Family Method
73155	No alias	DREB and EAR motif protein 3	0.02	Orthogroups_2024-Update
AC198403.3_FG001	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
At1g15360	No alias	Ethylene-responsive transcription factor WIN1...	0.03	Orthogroups_2024-Update
At2g31230	No alias	Ethylene-responsive transcription factor 15...	0.03	Orthogroups_2024-Update
At5g51990	No alias	C-repeat binding factor 4 [Source:UniProtKB/TrEMBL;Acc:B2BJ26]	0.03	Orthogroups_2024-Update
Bradi1g72449	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Bradi2g29960	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Bradi3g58980	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Brara.B03778.1	No alias	subgroup ERF-X transcription factor	0.02	Orthogroups_2024-Update
Brara.D01886.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Brara.F03559.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Glyma.04G251400	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.10G193400	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.11G199300	No alias	cytokinin response factor 4	0.02	Orthogroups_2024-Update
HORVU1Hr1G048870.1	No alias	subgroup ERF-III transcription factor	0.01	Orthogroups_2024-Update
HORVU6Hr1G065430.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
HORVU7Hr1G037180.1	No alias	subgroup ERF-I transcription factor	0.02	Orthogroups_2024-Update
LOC_Os12g39330	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
MA_2446g0010	No alias	(at2g20880 : 136.0) Integrase-type DNA-binding...	0.03	Orthogroups_2024-Update
MA_65190g0010	No alias	(at5g19790 : 91.3) encodes a member of the ERF (ethylene...	0.02	Orthogroups_2024-Update
PSME_00003641-RA	No alias	(at3g14230 : 136.0) encodes a member of the ERF...	0.02	Orthogroups_2024-Update
PSME_00016017-RA	No alias	(at5g25190 : 150.0) encodes a member of the ERF...	0.03	Orthogroups_2024-Update
PSME_00042940-RA	No alias	(at1g53910 : 121.0) encodes a member of the ERF...	0.03	Orthogroups_2024-Update
Potri.001G155700	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.002G172200	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.008G073600	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Potri.T050600	No alias	ethylene response factor 1	0.03	Orthogroups_2024-Update
Pp1s195_38V6	No alias	ap2 erf domain-containing transcription factor	0.02	Orthogroups_2024-Update
Pp1s64_47V6	No alias	ap2 erf domain-containing transcription factor	0.02	Orthogroups_2024-Update
Seita.1G257600.1	No alias	subgroup ERF-IX transcription factor	0.02	Orthogroups_2024-Update
Seita.4G016400.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Sobic.001G169400.2	No alias	transcription factor *(ERN1) & subgroup ERF-V...	0.02	Orthogroups_2024-Update
Sobic.004G295500.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
Sobic.005G014800.1	No alias	transcription factor *(CRF) & subgroup ERF-VI...	0.03	Orthogroups_2024-Update
Solyc01g065980	No alias	Ethylene Response Factor E.4	0.02	Orthogroups_2024-Update
Solyc09g075420	No alias	ethylene response factor E.1	0.03	Orthogroups_2024-Update
Sopen03g024410	No alias	AP2 domain	0.02	Orthogroups_2024-Update
Sopen04g002250	No alias	AP2 domain	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	16Dec
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000272	polysaccharide catabolic process	IEP	Predicted GO
MF	GO:0004478	methionine adenosyltransferase activity	IEP	Predicted GO
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Predicted GO
MF	GO:0004609	phosphatidylserine decarboxylase activity	IEP	Predicted GO
MF	GO:0004616	phosphogluconate dehydrogenase (decarboxylating) activity	IEP	Predicted GO
MF	GO:0004645	phosphorylase activity	IEP	Predicted GO
MF	GO:0004751	ribose-5-phosphate isomerase activity	IEP	Predicted GO
MF	GO:0005509	calcium ion binding	IEP	Predicted GO
BP	GO:0005975	carbohydrate metabolic process	IEP	Predicted GO
BP	GO:0006081	cellular aldehyde metabolic process	IEP	Predicted GO
BP	GO:0006098	pentose-phosphate shunt	IEP	Predicted GO
BP	GO:0006556	S-adenosylmethionine biosynthetic process	IEP	Predicted GO
BP	GO:0006732	coenzyme metabolic process	IEP	Predicted GO
BP	GO:0006739	NADP metabolic process	IEP	Predicted GO
MF	GO:0008138	protein tyrosine/serine/threonine phosphatase activity	IEP	Predicted GO
MF	GO:0008184	glycogen phosphorylase activity	IEP	Predicted GO
BP	GO:0009052	pentose-phosphate shunt, non-oxidative branch	IEP	Predicted GO
MF	GO:0015098	molybdate ion transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015103	inorganic anion transmembrane transporter activity	IEP	Predicted GO
BP	GO:0015689	molybdate ion transport	IEP	Predicted GO
MF	GO:0016160	amylase activity	IEP	Predicted GO
MF	GO:0016161	beta-amylase activity	IEP	Predicted GO
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Predicted GO
MF	GO:0016860	intramolecular oxidoreductase activity	IEP	Predicted GO
MF	GO:0016861	intramolecular oxidoreductase activity, interconverting aldoses and ketoses	IEP	Predicted GO
BP	GO:0019637	organophosphate metabolic process	IEP	Predicted GO
BP	GO:0019682	glyceraldehyde-3-phosphate metabolic process	IEP	Predicted GO
BP	GO:0019693	ribose phosphate metabolic process	IEP	Predicted GO
CC	GO:0030126	COPI vesicle coat	IEP	Predicted GO
BP	GO:0046500	S-adenosylmethionine metabolic process	IEP	Predicted GO
MF	GO:0051087	chaperone binding	IEP	Predicted GO
BP	GO:0051156	glucose 6-phosphate metabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	121	170

External Links

No external refs found!

Brara.A01769.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation