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Brara.A01859.1


Description : OPC-8


Gene families : OG_42_0003414 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003414_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.A01859.1
Cluster HCAA Clusters: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
At2g35690 No alias Putative peroxisomal acyl-coenzyme A oxidase 1.2... 0.03 Orthogroups_2024-Update
Solyc08g078400 No alias peroxisomal acyl-CoA oxidase 1A 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003997 acyl-CoA oxidase activity IEA 16Dec
CC GO:0005777 peroxisome IEA 16Dec
BP GO:0006635 fatty acid beta-oxidation IEA 16Dec
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
InterPro domains Description Start Stop
IPR029320 Acyl-CoA_ox_N 17 132
IPR002655 Acyl-CoA_oxidase_C 479 656
IPR006091 Acyl-CoA_Oxase/DH_cen-dom 134 236
No external refs found!