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  5. Brara.A01876.1

Brara.A01876.1


Description : Unknown function


Gene families : OG_42_0007352 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007352_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.A01876.1
Cluster HCAA Clusters: Cluster_187

Target Alias Description ECC score Gene Family Method Actions
107914 No alias DEA(D/H)-box RNA helicase family protein 0.03 Orthogroups_2024-Update
Bradi4g07397 No alias DEA(D/H)-box RNA helicase family protein 0.02 Orthogroups_2024-Update
Cre10.g420900 No alias DEA(D/H)-box RNA helicase family protein 0.01 Orthogroups_2024-Update
Kfl00083_0290 kfl00083_0290_v1.1 (at4g16630 : 610.0) DEA(D/H)-box RNA helicase family... 0.02 Orthogroups_2024-Update
Sopen04g035190 No alias DEAD/DEAH box helicase 0.02 Orthogroups_2024-Update
evm.model.tig00000792.35 No alias (at4g16630 : 441.0) DEA(D/H)-box RNA helicase family... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA 16Dec
MF GO:0005524 ATP binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
BP GO:0022618 ribonucleoprotein complex assembly IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0042255 ribosome assembly IEP Predicted GO
BP GO:0042256 mature ribosome assembly IEP Predicted GO
MF GO:0043021 ribonucleoprotein complex binding IEP Predicted GO
MF GO:0043022 ribosome binding IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
BP GO:0070925 organelle assembly IEP Predicted GO
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Predicted GO
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 171 341
IPR001650 Helicase_C 384 487
No external refs found!