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  5. Brara.A01906.1

Brara.A01906.1


Description : Unknown function


Gene families : OG_42_0000057 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000057_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.A01906.1
Cluster HCAA Clusters: Cluster_394

Target Alias Description ECC score Gene Family Method Actions
At3g51700 No alias ATP-dependent DNA helicase [Source:UniProtKB/TrEMBL;Acc:Q9SCT8] 0.03 Orthogroups_2024-Update
Brara.D00782.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.I02702.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Glyma.01G135100 No alias PIF1 helicase 0.03 Orthogroups_2024-Update
Glyma.04G116000 No alias PIF1 helicase 0.04 Orthogroups_2024-Update
Glyma.09G080200 No alias PIF1 helicase 0.03 Orthogroups_2024-Update
Glyma.12G111300 No alias PIF1 helicase 0.03 Orthogroups_2024-Update
Glyma.15G190000 No alias Function unknown 0.03 Orthogroups_2024-Update
Glyma.15G193800 No alias PIF1 helicase 0.03 Orthogroups_2024-Update
Glyma.16G109000 No alias PIF1 helicase 0.03 Orthogroups_2024-Update
Glyma.20G059700 No alias Function unknown 0.04 Orthogroups_2024-Update
LOC_Os04g28820 No alias retrotransposon protein, putative, unclassified, expressed 0.03 Orthogroups_2024-Update
LOC_Os07g45750 No alias retrotransposon protein, putative, unclassified, expressed 0.03 Orthogroups_2024-Update
LOC_Os12g06230 No alias retrotransposon protein, putative, unclassified, expressed 0.03 Orthogroups_2024-Update
Potri.001G214200 No alias PIF1 helicase 0.03 Orthogroups_2024-Update
Potri.008G167100 No alias PIF1 helicase 0.02 Orthogroups_2024-Update
Seita.1G070500.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.1G145600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.1G149400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.5G402100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.6G126900.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.8G193900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.9G083700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen11g011570 No alias PIF1-like helicase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Predicted GO
MF GO:0003678 DNA helicase activity IEP Predicted GO
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predicted GO
MF GO:0004386 helicase activity IEP Predicted GO
MF GO:0004866 endopeptidase inhibitor activity IEP Predicted GO
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Predicted GO
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0030414 peptidase inhibitor activity IEP Predicted GO
MF GO:0030570 pectate lyase activity IEP Predicted GO
BP GO:0032200 telomere organization IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
BP GO:0060249 anatomical structure homeostasis IEP Predicted GO
MF GO:0061134 peptidase regulator activity IEP Predicted GO
MF GO:0061135 endopeptidase regulator activity IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!