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  5. Brara.A01922.1

Brara.A01922.1


Description : EC_3.2 glycosylase


Gene families : OG_42_0000200 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000200_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.A01922.1
Cluster HCAA Clusters: Cluster_165

Target Alias Description ECC score Gene Family Method Actions
A4A49_01055 No alias glucan endo-1,3-beta-glucosidase, acidic isoform gi9 0.03 Orthogroups_2024-Update
At3g57240 No alias Probable glucan endo-1,3-beta-glucosidase BG3... 0.05 Orthogroups_2024-Update
Brara.D00298.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Brara.D00299.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Brara.D00301.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Brara.D00302.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Brara.J01566.1 No alias EC_3.2 glycosylase 0.04 Orthogroups_2024-Update
Glyma.16G113200 No alias Glycosyl hydrolase superfamily protein 0.03 Orthogroups_2024-Update
HORVU3Hr1G105190.4 No alias EC_3.2 glycosylase 0.02 Orthogroups_2024-Update
LOC_Os01g71820 No alias glycosyl hydrolases family 17, putative, expressed 0.03 Orthogroups_2024-Update
MA_202096g0010 No alias (at4g16260 : 288.0) Glycosyl hydrolase superfamily... 0.03 Orthogroups_2024-Update
Mp7g13150.1 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.02 Orthogroups_2024-Update
Mp7g13180.1 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.02 Orthogroups_2024-Update
PSME_00010153-RA No alias (p15797|e13b_tobac : 286.0) Glucan... 0.03 Orthogroups_2024-Update
PSME_00019982-RA No alias (p07979|gub_nicpl : 308.0) Lichenase precursor (EC... 0.02 Orthogroups_2024-Update
PSME_00023820-RA No alias (p07979|gub_nicpl : 308.0) Lichenase precursor (EC... 0.02 Orthogroups_2024-Update
Potri.001G255100 No alias Glycosyl hydrolase superfamily protein 0.03 Orthogroups_2024-Update
Potri.002G089200 No alias Glycosyl hydrolase superfamily protein 0.03 Orthogroups_2024-Update
Potri.006G046100 No alias beta-1,3-glucanase 1 0.03 Orthogroups_2024-Update
Potri.006G048100 No alias beta-1,3-glucanase 1 0.03 Orthogroups_2024-Update
Sobic.008G146700.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Solyc01g008620 No alias Beta-1,3-glucanase (AHRD V3.3 *** Q9SYX6_TOBAC) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA 16Dec
BP GO:0005975 carbohydrate metabolic process IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004126 cytidine deaminase activity IEP Predicted GO
MF GO:0004312 fatty acid synthase activity IEP Predicted GO
MF GO:0004356 glutamate-ammonia ligase activity IEP Predicted GO
BP GO:0006213 pyrimidine nucleoside metabolic process IEP Predicted GO
BP GO:0006216 cytidine catabolic process IEP Predicted GO
BP GO:0008037 cell recognition IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0009119 ribonucleoside metabolic process IEP Predicted GO
BP GO:0009164 nucleoside catabolic process IEP Predicted GO
MF GO:0009922 fatty acid elongase activity IEP Predicted GO
BP GO:0009972 cytidine deamination IEP Predicted GO
MF GO:0016211 ammonia ligase activity IEP Predicted GO
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Predicted GO
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predicted GO
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Predicted GO
MF GO:0019239 deaminase activity IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
CC GO:0030119 AP-type membrane coat adaptor complex IEP Predicted GO
CC GO:0030131 clathrin adaptor complex IEP Predicted GO
BP GO:0034656 nucleobase-containing small molecule catabolic process IEP Predicted GO
BP GO:0042454 ribonucleoside catabolic process IEP Predicted GO
BP GO:0046087 cytidine metabolic process IEP Predicted GO
BP GO:0046131 pyrimidine ribonucleoside metabolic process IEP Predicted GO
BP GO:0046133 pyrimidine ribonucleoside catabolic process IEP Predicted GO
BP GO:0046135 pyrimidine nucleoside catabolic process IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072529 pyrimidine-containing compound catabolic process IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
BP GO:1901658 glycosyl compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000490 Glyco_hydro_17 26 336
No external refs found!