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  5. Brara.A01952.1

Brara.A01952.1


Description : Unknown function


Gene families : OG_42_0003744 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003744_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.A01952.1
Cluster HCAA Clusters: Cluster_82

Target Alias Description ECC score Gene Family Method Actions
Cre07.g319750 No alias RNA helicase 1 0.01 Orthogroups_2024-Update
HORVU6Hr1G085490.2 No alias Unknown function 0.02 Orthogroups_2024-Update
Mp3g20650.1 No alias DEAD-box ATP-dependent RNA helicase 1 OS=Arabidopsis... 0.01 Orthogroups_2024-Update
Mp4g13330.1 No alias DEAD-box ATP-dependent RNA helicase 1 OS=Arabidopsis... 0.01 Orthogroups_2024-Update
Sopen07g002020 No alias DEAD/DEAH box helicase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA 16Dec
MF GO:0005524 ATP binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003743 translation initiation factor activity IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001650 Helicase_C 329 440
IPR011545 DEAD/DEAH_box_helicase_dom 62 293
No external refs found!