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  5. Brara.A02004.1

Brara.A02004.1


Description : BBX class-V transcription factor


Gene families : OG_42_0000803 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000803_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.A02004.1
Cluster HCAA Clusters: Cluster_159

Target Alias Description ECC score Gene Family Method Actions
A4A49_12129 No alias hypothetical protein 0.03 Orthogroups_2024-Update
At3g21890 No alias BBX31 [Source:UniProtKB/TrEMBL;Acc:A0A178VEW7] 0.04 Orthogroups_2024-Update
Brara.A01701.1 No alias BBX class-V transcription factor 0.04 Orthogroups_2024-Update
Glyma.07G020400 No alias B-box 32 0.04 Orthogroups_2024-Update
Glyma.08G221600 No alias B-box 32 0.06 Orthogroups_2024-Update
Glyma.12G103800 No alias B-box type zinc finger family protein 0.04 Orthogroups_2024-Update
Glyma.12G196200 No alias B-box type zinc finger family protein 0.05 Orthogroups_2024-Update
LOC_Os02g07930 No alias B-box zinc finger family protein, putative, expressed 0.03 Orthogroups_2024-Update
MA_332069g0010 No alias (at5g54470 : 94.4) B-box type zinc finger family... 0.03 Orthogroups_2024-Update
Potri.001G414700 No alias B-box type zinc finger family protein 0.03 Orthogroups_2024-Update
Potri.011G125400 No alias B-box type zinc finger family protein 0.03 Orthogroups_2024-Update
Pp1s364_14V6 No alias F24B18.9; CONSTANS B-box zinc finger family protein... 0.02 Orthogroups_2024-Update
Pp1s38_346V6 No alias zinc finger (b-box type) family protein 0.04 Orthogroups_2024-Update
Sobic.010G217532.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc02g079430 No alias Zinc finger, B-box (AHRD V3.3 *-* A0A103Y479_CYNCS) 0.04 Orthogroups_2024-Update
Solyc06g063280 No alias LOW QUALITY:Zinc finger family protein (AHRD V3.3 ***... 0.05 Orthogroups_2024-Update
Solyc07g052620 No alias LOW QUALITY:Zinc finger, B-box (AHRD V3.3 *** A0A118JXT6_CYNCS) 0.03 Orthogroups_2024-Update
Solyc07g053140 No alias Zinc finger, B-box (AHRD V3.3 *** A0A103Y7X2_CYNCS) 0.04 Orthogroups_2024-Update
Solyc10g006750 No alias ABC-2 and Plant PDR ABC-type transporter family protein... 0.06 Orthogroups_2024-Update
Solyc12g005660 No alias Zinc finger, B-box (AHRD V3.3 *-* A0A103Y7X2_CYNCS) 0.05 Orthogroups_2024-Update
Solyc12g005750 No alias LOW QUALITY:Zinc finger protein CONSTANS-LIKE 14 (AHRD... 0.04 Orthogroups_2024-Update
Sopen07g026690 No alias B-box zinc finger 0.03 Orthogroups_2024-Update
Sopen12g001590 No alias B-box zinc finger 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Predicted GO
MF GO:0004512 inositol-3-phosphate synthase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0006020 inositol metabolic process IEP Predicted GO
BP GO:0006021 inositol biosynthetic process IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0031072 heat shock protein binding IEP Predicted GO
CC GO:0034357 photosynthetic membrane IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
CC GO:0042651 thylakoid membrane IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0046165 alcohol biosynthetic process IEP Predicted GO
BP GO:0046173 polyol biosynthetic process IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Predicted GO
BP GO:0090407 organophosphate biosynthetic process IEP Predicted GO
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000315 Znf_B-box 25 61
No external refs found!