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  5. Brara.A02008.1

Brara.A02008.1


Description : group-I formin actin filament elongation factor


Gene families : OG_42_0000265 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000265_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.A02008.1
Cluster HCAA Clusters: Cluster_93

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G040965 No alias formin homology 1 0.04 Orthogroups_2024-Update
Glyma.05G105100 No alias formin homolog 6 0.04 Orthogroups_2024-Update
Glyma.11G048600 No alias formin homolog 6 0.04 Orthogroups_2024-Update
Glyma.12G102700 No alias formin 3 0.03 Orthogroups_2024-Update
Potri.005G026300 No alias Actin-binding FH2 (formin homology 2) family protein 0.03 Orthogroups_2024-Update
Potri.017G009900 No alias formin homology 1 0.04 Orthogroups_2024-Update
Seita.5G414700.1 No alias group-I formin actin filament elongation factor 0.03 Orthogroups_2024-Update
Sobic.003G389100.2 No alias group-I formin actin filament elongation factor 0.03 Orthogroups_2024-Update
Sobic.009G002200.1 No alias group-I formin actin filament elongation factor 0.03 Orthogroups_2024-Update
Solyc05g006430 No alias Formin-like protein (AHRD V3.3 *** K4BWH0_SOLLC) 0.03 Orthogroups_2024-Update
Sopen01g043160 No alias Formin Homology 2 Domain 0.03 Orthogroups_2024-Update
Sopen05g002360 No alias Formin Homology 2 Domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
InterPro domains Description Start Stop
IPR015425 FH2_Formin 383 801
No external refs found!