1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.A02141.1

Brara.A02141.1


Description : centrin component *(CEN1/2) of TREX-2 mRNP trafficking complex & multifunctional centrin *(CEN1/2) & calcium sensor *(CML)


Gene families : OG_42_0002887 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002887_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.A02141.1
Cluster HCAA Clusters: Cluster_209

Target Alias Description ECC score Gene Family Method Actions
Bradi3g23240 No alias centrin2 0.03 Orthogroups_2024-Update
GRMZM2G048846 No alias centrin2 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004484 mRNA guanylyltransferase activity IEP Predicted GO
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
BP GO:0006370 7-methylguanosine mRNA capping IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
MF GO:0008192 RNA guanylyltransferase activity IEP Predicted GO
BP GO:0009452 7-methylguanosine RNA capping IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predicted GO
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
MF GO:0016972 thiol oxidase activity IEP Predicted GO
CC GO:0017119 Golgi transport complex IEP Predicted GO
BP GO:0036260 RNA capping IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
MF GO:0070568 guanylyltransferase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 99 162
IPR002048 EF_hand_dom 26 89
No external refs found!