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At1g75780


Description : Tubulin beta-1 chain [Source:UniProtKB/Swiss-Prot;Acc:P12411]


Gene families : OG_42_0000212 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000212_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At1g75780
Cluster HCCA clusters: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
Bradi2g10970 No alias beta-6 tubulin 0.04 Orthogroups_2024-Update
Bradi2g52790 No alias beta-6 tubulin 0.04 Orthogroups_2024-Update
Glyma.05G207500 No alias beta-6 tubulin 0.03 Orthogroups_2024-Update
MA_55439g0010 No alias (at1g75780 : 490.0) beta tubulin gene downregulated by... 0.03 Orthogroups_2024-Update
PSME_00001574-RA No alias (q76fs3|tbb6_orysa : 424.0) Tubulin beta-6 chain (Beta-6... 0.04 Orthogroups_2024-Update
Potri.009G040200 No alias tubulin beta 8 0.02 Orthogroups_2024-Update
Pp1s252_101V6 No alias tubulin beta 0.02 Orthogroups_2024-Update
Pp1s93_158V6 No alias tubulin beta 0.02 Orthogroups_2024-Update
Solyc06g005910 No alias Tubulin beta chain (AHRD V3.3 *** M1BVE7_SOLTU) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Predicted GO
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Predicted GO
MF GO:0009678 hydrogen-translocating pyrophosphatase activity IEP Predicted GO
MF GO:0016289 CoA hydrolase activity IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
CC GO:0017119 Golgi transport complex IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
InterPro domains Description Start Stop
IPR018316 Tubulin/FtsZ_2-layer-sand-dom 262 383
IPR003008 Tubulin_FtsZ_GTPase 3 212
No external refs found!