Brara.A02394.1

Description : E2F-type transcription factor & cell cycle interphase transcription factor *(DEL)

Gene families : OG_42_0002758 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002758_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.A02394.1
Cluster	HCAA Clusters: Cluster_58

Target	Alias	Description	ECC score	Gene Family Method
At3g01330	No alias	E2F transcription factor-like E2FF...	0.04	Orthogroups_2024-Update
Glyma.06G186800	No alias	DP-E2F-like 1	0.04	Orthogroups_2024-Update
Glyma.17G093600	No alias	DP-E2F-like 1	0.04	Orthogroups_2024-Update
Kfl00334_0090	kfl00334_0090_v1.1	(at3g48160 : 187.0) E2F-like protein, an inhibitor of...	0.03	Orthogroups_2024-Update
MA_2814g0010	No alias	(at3g48160 : 246.0) E2F-like protein, an inhibitor of...	0.07	Orthogroups_2024-Update
Solyc03g113760	No alias	E2F transcription factor-like E2FE (AHRD V3.3 *** W9SXR3_9ROSA)	0.03	Orthogroups_2024-Update
Sopen03g032810	No alias	E2F/DP family winged-helix DNA-binding domain	0.06	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005667	transcription factor complex	IEA	16Dec
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006260	DNA replication	IEP	Predicted GO
BP	GO:0006275	regulation of DNA replication	IEP	Predicted GO
BP	GO:0006605	protein targeting	IEP	Predicted GO
MF	GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	IEP	Predicted GO
MF	GO:0016717	oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	IEP	Predicted GO
MF	GO:0016759	cellulose synthase activity	IEP	Predicted GO
MF	GO:0016760	cellulose synthase (UDP-forming) activity	IEP	Predicted GO
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	Predicted GO
BP	GO:0030243	cellulose metabolic process	IEP	Predicted GO
BP	GO:0030244	cellulose biosynthetic process	IEP	Predicted GO
MF	GO:0043138	3'-5' DNA helicase activity	IEP	Predicted GO
BP	GO:0051052	regulation of DNA metabolic process	IEP	Predicted GO
BP	GO:0051726	regulation of cell cycle	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003316	E2F_WHTH_DNA-bd_dom	33	97
IPR003316	E2F_WHTH_DNA-bd_dom	166	244

External Links

No external refs found!