1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.A02456.1

Brara.A02456.1


Description : cyclic nucleotide-gated cation channel *(CNGC)


Gene families : OG_42_0000108 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000108_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.A02456.1
Cluster HCAA Clusters: Cluster_218

Target Alias Description ECC score Gene Family Method Actions
At5g14870 No alias Cyclic nucleotide-gated ion channel 18... 0.03 Orthogroups_2024-Update
Bradi3g57510 No alias cyclic nucleotide-binding transporter 1 0.02 Orthogroups_2024-Update
Glyma.09G168500 No alias cyclic nucleotide-binding transporter 1 0.03 Orthogroups_2024-Update
LOC_Os03g55100 No alias cyclic nucleotide-gated ion channel 2, putative, expressed 0.02 Orthogroups_2024-Update
MA_10431327g0020 No alias (at5g54250 : 177.0) member of Cyclic nucleotide gated... 0.04 Orthogroups_2024-Update
MA_25248g0010 No alias (at1g15990 : 431.0) member of Cyclic nucleotide gated... 0.04 Orthogroups_2024-Update
Seita.5G341100.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.03 Orthogroups_2024-Update
Solyc05g050360 No alias cyclic nucleotide gated channel 1 (AHRD V3.3 *** AT5G53130.1) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA 16Dec
BP GO:0006811 ion transport IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008198 ferrous iron binding IEP Predicted GO
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 209 501
No external refs found!