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  5. Brara.A02658.1

Brara.A02658.1


Description : plant-specific ALOG-type transcription factor


Gene families : OG_42_0000294 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000294_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.A02658.1
Cluster HCAA Clusters: Cluster_382

Target Alias Description ECC score Gene Family Method Actions
A4A49_27404 No alias protein light-dependent short hypocotyls 3 0.04 Orthogroups_2024-Update
Brara.B01233.1 No alias plant-specific ALOG-type transcription factor 0.05 Orthogroups_2024-Update
Brara.D01881.1 No alias plant-specific ALOG-type transcription factor 0.03 Orthogroups_2024-Update
Brara.E03441.1 No alias plant-specific ALOG-type transcription factor 0.04 Orthogroups_2024-Update
Brara.G03612.1 No alias plant-specific ALOG-type transcription factor 0.03 Orthogroups_2024-Update
Brara.J01236.1 No alias plant-specific ALOG-type transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G147241 No alias Protein of unknown function (DUF640) 0.02 Orthogroups_2024-Update
Glyma.14G197300 No alias Protein of unknown function (DUF640) 0.02 Orthogroups_2024-Update
Glyma.20G223100 No alias Protein of unknown function (DUF640) 0.04 Orthogroups_2024-Update
LOC_Os05g28040 No alias DUF640 domain containing protein, putative, expressed 0.03 Orthogroups_2024-Update
Pp1s73_217V6 No alias No description available 0.03 Orthogroups_2024-Update
Sobic.001G219400.1 No alias plant-specific ALOG-type transcription factor 0.02 Orthogroups_2024-Update
Solyc05g055020 No alias LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640)... 0.03 Orthogroups_2024-Update
Solyc09g025280 No alias LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640)... 0.04 Orthogroups_2024-Update
Sopen06g035260 No alias Protein of unknown function (DUF640) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Predicted GO
MF GO:0003993 acid phosphatase activity IEP Predicted GO
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Predicted GO
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Predicted GO
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predicted GO
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
MF GO:0032182 ubiquitin-like protein binding IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
MF GO:0043130 ubiquitin binding IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Predicted GO
BP GO:1901264 carbohydrate derivative transport IEP Predicted GO
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR006936 ALOG_dom 42 160
No external refs found!