Brara.A02663.1

Description : subgroup ERF-IX transcription factor

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.A02663.1
Cluster	HCAA Clusters: Cluster_9

Target	Alias	Description	ECC score	Gene Family Method
A4A49_35008	No alias	dehydration-responsive element-binding protein 3	0.04	Orthogroups_2024-Update
At4g25470	No alias	C-repeat binding factor 2 [Source:UniProtKB/TrEMBL;Acc:B2BIW9]	0.04	Orthogroups_2024-Update
Bradi1g72449	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Bradi4g31040	No alias	related to AP2 2	0.03	Orthogroups_2024-Update
Brara.G02420.1	No alias	transcription factor *(CRF) & subgroup ERF-VI...	0.04	Orthogroups_2024-Update
GRMZM2G301860	No alias	DREB and EAR motif protein 3	0.03	Orthogroups_2024-Update
Glyma.02G294100	No alias	ethylene response factor 7	0.04	Orthogroups_2024-Update
Glyma.11G014800	No alias	Integrase-type DNA-binding superfamily protein	0.05	Orthogroups_2024-Update
HORVU5Hr1G080340.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
HORVU7Hr1G037180.1	No alias	subgroup ERF-I transcription factor	0.04	Orthogroups_2024-Update
LOC_Os02g43790	No alias	ethylene-responsive transcription factor, putative, expressed	0.02	Orthogroups_2024-Update
MA_120531g0010	No alias	(at1g28360 : 97.1) encodes a member of the ERF (ethylene...	0.03	Orthogroups_2024-Update
PSME_00051454-RA	No alias	(at1g19210 : 98.6) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
Potri.001G110800	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.006G104200	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Pp1s25_13V6	No alias	ap2 erf domain-containing transcription factor	0.05	Orthogroups_2024-Update
Sobic.005G014800.1	No alias	transcription factor *(CRF) & subgroup ERF-VI...	0.02	Orthogroups_2024-Update
Sopen06g024810	No alias	AP2 domain	0.02	Orthogroups_2024-Update
Sopen07g028150	No alias	AP2 domain	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	16Dec
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0009521	photosystem	IEP	Predicted GO
CC	GO:0009522	photosystem I	IEP	Predicted GO
CC	GO:0009523	photosystem II	IEP	Predicted GO
CC	GO:0009538	photosystem I reaction center	IEP	Predicted GO
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	Predicted GO
BP	GO:0010109	regulation of photosynthesis	IEP	Predicted GO
BP	GO:0010207	photosystem II assembly	IEP	Predicted GO
MF	GO:0010242	oxygen evolving activity	IEP	Predicted GO
BP	GO:0015979	photosynthesis	IEP	Predicted GO
MF	GO:0016854	racemase and epimerase activity	IEP	Predicted GO
MF	GO:0016857	racemase and epimerase activity, acting on carbohydrates and derivatives	IEP	Predicted GO
CC	GO:0019898	extrinsic component of membrane	IEP	Predicted GO
MF	GO:0030145	manganese ion binding	IEP	Predicted GO
CC	GO:0032991	protein-containing complex	IEP	Predicted GO
BP	GO:0042548	regulation of photosynthesis, light reaction	IEP	Predicted GO
BP	GO:0042549	photosystem II stabilization	IEP	Predicted GO
BP	GO:0043467	regulation of generation of precursor metabolites and energy	IEP	Predicted GO
CC	GO:0044424	intracellular part	IEP	Predicted GO
CC	GO:0044425	membrane part	IEP	Predicted GO
CC	GO:0044436	thylakoid part	IEP	Predicted GO
CC	GO:0044464	cell part	IEP	Predicted GO
CC	GO:0098796	membrane protein complex	IEP	Predicted GO
CC	GO:1902494	catalytic complex	IEP	Predicted GO
CC	GO:1990204	oxidoreductase complex	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	73	123

External Links

No external refs found!

Brara.A02663.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation