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  5. Brara.A02732.1

Brara.A02732.1


Description : deubiquitinase *(OTU6-12)


Gene families : OG_42_0000871 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000871_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.A02732.1
Cluster HCAA Clusters: Cluster_208

Target Alias Description ECC score Gene Family Method Actions
Bradi1g72850 No alias Cysteine proteinases superfamily protein 0.03 Orthogroups_2024-Update
Cre09.g392250 No alias Cysteine proteinases superfamily protein 0.04 Orthogroups_2024-Update
GRMZM2G074634 No alias Cysteine proteinases superfamily protein 0.04 Orthogroups_2024-Update
HORVU6Hr1G091360.6 No alias deubiquitinase *(OTU6-12) 0.03 Orthogroups_2024-Update
HORVU6Hr1G091430.3 No alias deubiquitinase *(OTU6-12) 0.03 Orthogroups_2024-Update
Kfl00505_0050 kfl00505_0050_v1.1 (at3g02070 : 197.0) Cysteine proteinases superfamily... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0008104 protein localization IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
BP GO:0016197 endosomal transport IEP Predicted GO
BP GO:0016482 cytosolic transport IEP Predicted GO
CC GO:0030906 retromer, cargo-selective complex IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
BP GO:0042147 retrograde transport, endosome to Golgi IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
InterPro domains Description Start Stop
IPR003323 OTU_dom 105 194
No external refs found!