Brara.A02735.1


Description : component *(eL27) of large ribosomal-subunit (LSU) proteome


Gene families : OG_42_0001324 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001324_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.A02735.1
Cluster HCAA Clusters: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
166700 No alias Ribosomal L27e protein family 0.15 Orthogroups_2024-Update
A4A49_05318 No alias 60s ribosomal protein l27 0.11 Orthogroups_2024-Update
At2g32220 No alias 60S ribosomal protein L27-1... 0.04 Orthogroups_2024-Update
At3g22230 No alias 60S ribosomal protein L27-2... 0.03 Orthogroups_2024-Update
At4g15000 No alias 60S ribosomal protein L27 [Source:UniProtKB/TrEMBL;Acc:Q0WRB8] 0.04 Orthogroups_2024-Update
Brara.A02020.1 No alias component *(eL27) of large ribosomal-subunit (LSU) proteome 0.08 Orthogroups_2024-Update
Brara.C03864.1 No alias component *(eL27) of large ribosomal-subunit (LSU) proteome 0.13 Orthogroups_2024-Update
Brara.E01420.1 No alias component *(eL27) of large ribosomal-subunit (LSU) proteome 0.08 Orthogroups_2024-Update
Cre17.g701650 No alias Ribosomal L27e protein family 0.13 Orthogroups_2024-Update
GRMZM2G016250 No alias Ribosomal L27e protein family 0.09 Orthogroups_2024-Update
GRMZM2G326066 No alias Ribosomal L27e protein family 0.06 Orthogroups_2024-Update
Glyma.05G132800 No alias Ribosomal L27e protein family 0.02 Orthogroups_2024-Update
Glyma.09G052100 No alias Ribosomal L27e protein family 0.04 Orthogroups_2024-Update
Glyma.15G158400 No alias Ribosomal L27e protein family 0.12 Orthogroups_2024-Update
HORVU7Hr1G063280.1 No alias component *(eL27) of large ribosomal-subunit (LSU) proteome 0.05 Orthogroups_2024-Update
Kfl00071_0270 kfl00071_0270_v1.1 (q05462|rl27_pea : 209.0) 60S ribosomal protein L27 -... 0.06 Orthogroups_2024-Update
LOC_Os02g18380 No alias 60S ribosomal protein L27-3, putative, expressed 0.05 Orthogroups_2024-Update
MA_3390g0010 No alias (at3g22230 : 216.0) Ribosomal L27e protein family;... 0.02 Orthogroups_2024-Update
PSME_00015628-RA No alias (at3g22230 : 220.0) Ribosomal L27e protein family;... 0.09 Orthogroups_2024-Update
Potri.001G342500 No alias Ribosomal L27e protein family 0.04 Orthogroups_2024-Update
Pp1s101_74V6 No alias ribosomal protein 0.11 Orthogroups_2024-Update
Pp1s221_49V6 No alias ribosomal protein 0.2 Orthogroups_2024-Update
Pp1s83_116V6 No alias 60S ribosomal protein L27 [Pisum sativum] 0.15 Orthogroups_2024-Update
Seita.4G160400.1 No alias component *(eL27) of large ribosomal-subunit (LSU) proteome 0.1 Orthogroups_2024-Update
Sobic.006G221200.1 No alias component *(eL27) of large ribosomal-subunit (LSU) proteome 0.1 Orthogroups_2024-Update
Sobic.010G230700.1 No alias component *(eL27) of large ribosomal-subunit (LSU) proteome 0.13 Orthogroups_2024-Update
Solyc06g073300 No alias 60S ribosomal protein L27 (AHRD V3.3 *** A0A0V0HNB9_SOLCH) 0.09 Orthogroups_2024-Update
Solyc07g043360 No alias 60S ribosomal protein L27 (AHRD V3.3 *** K4CEJ5_SOLLC) 0.05 Orthogroups_2024-Update
Sopen06g029660 No alias Ribosomal L27e protein family 0.12 Orthogroups_2024-Update
Sopen07g022920 No alias Ribosomal L27e protein family 0.1 Orthogroups_2024-Update
evm.model.contig_2045.6 No alias (p41101|rl27_soltu : 144.0) 60S ribosomal protein L27 -... 0.16 Orthogroups_2024-Update
evm.model.tig00021275.23 No alias (at3g22230 : 163.0) Ribosomal L27e protein family;... 0.09 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA 16Dec
CC GO:0005840 ribosome IEA 16Dec
BP GO:0006412 translation IEA 16Dec
Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0006399 tRNA metabolic process IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0006606 protein import into nucleus IEP Predicted GO
BP GO:0006913 nucleocytoplasmic transport IEP Predicted GO
BP GO:0008033 tRNA processing IEP Predicted GO
MF GO:0008175 tRNA methyltransferase activity IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
BP GO:0010206 photosystem II repair IEP Predicted GO
BP GO:0010207 photosystem II assembly IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
CC GO:0016272 prefoldin complex IEP Predicted GO
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Predicted GO
BP GO:0017038 protein import IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
BP GO:0030091 protein repair IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
BP GO:0034504 protein localization to nucleus IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
BP GO:0051169 nuclear transport IEP Predicted GO
BP GO:0051170 import into nucleus IEP Predicted GO
MF GO:0061608 nuclear import signal receptor activity IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
MF GO:0140104 molecular carrier activity IEP Predicted GO
MF GO:0140142 nucleocytoplasmic carrier activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001141 Ribosomal_L27e 52 135
No external refs found!