Description : component *(eL27) of large ribosomal-subunit (LSU) proteome
Gene families : OG_42_0001324 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001324_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Brassica rapa: Brara.A02735.1 | |
Cluster | HCAA Clusters: Cluster_8 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
166700 | No alias | Ribosomal L27e protein family | 0.15 | Orthogroups_2024-Update | |
A4A49_05318 | No alias | 60s ribosomal protein l27 | 0.11 | Orthogroups_2024-Update | |
At2g32220 | No alias | 60S ribosomal protein L27-1... | 0.04 | Orthogroups_2024-Update | |
At3g22230 | No alias | 60S ribosomal protein L27-2... | 0.03 | Orthogroups_2024-Update | |
At4g15000 | No alias | 60S ribosomal protein L27 [Source:UniProtKB/TrEMBL;Acc:Q0WRB8] | 0.04 | Orthogroups_2024-Update | |
Brara.A02020.1 | No alias | component *(eL27) of large ribosomal-subunit (LSU) proteome | 0.08 | Orthogroups_2024-Update | |
Brara.C03864.1 | No alias | component *(eL27) of large ribosomal-subunit (LSU) proteome | 0.13 | Orthogroups_2024-Update | |
Brara.E01420.1 | No alias | component *(eL27) of large ribosomal-subunit (LSU) proteome | 0.08 | Orthogroups_2024-Update | |
Cre17.g701650 | No alias | Ribosomal L27e protein family | 0.13 | Orthogroups_2024-Update | |
GRMZM2G016250 | No alias | Ribosomal L27e protein family | 0.09 | Orthogroups_2024-Update | |
GRMZM2G326066 | No alias | Ribosomal L27e protein family | 0.06 | Orthogroups_2024-Update | |
Glyma.05G132800 | No alias | Ribosomal L27e protein family | 0.02 | Orthogroups_2024-Update | |
Glyma.09G052100 | No alias | Ribosomal L27e protein family | 0.04 | Orthogroups_2024-Update | |
Glyma.15G158400 | No alias | Ribosomal L27e protein family | 0.12 | Orthogroups_2024-Update | |
HORVU7Hr1G063280.1 | No alias | component *(eL27) of large ribosomal-subunit (LSU) proteome | 0.05 | Orthogroups_2024-Update | |
Kfl00071_0270 | kfl00071_0270_v1.1 | (q05462|rl27_pea : 209.0) 60S ribosomal protein L27 -... | 0.06 | Orthogroups_2024-Update | |
LOC_Os02g18380 | No alias | 60S ribosomal protein L27-3, putative, expressed | 0.05 | Orthogroups_2024-Update | |
MA_3390g0010 | No alias | (at3g22230 : 216.0) Ribosomal L27e protein family;... | 0.02 | Orthogroups_2024-Update | |
PSME_00015628-RA | No alias | (at3g22230 : 220.0) Ribosomal L27e protein family;... | 0.09 | Orthogroups_2024-Update | |
Potri.001G342500 | No alias | Ribosomal L27e protein family | 0.04 | Orthogroups_2024-Update | |
Pp1s101_74V6 | No alias | ribosomal protein | 0.11 | Orthogroups_2024-Update | |
Pp1s221_49V6 | No alias | ribosomal protein | 0.2 | Orthogroups_2024-Update | |
Pp1s83_116V6 | No alias | 60S ribosomal protein L27 [Pisum sativum] | 0.15 | Orthogroups_2024-Update | |
Seita.4G160400.1 | No alias | component *(eL27) of large ribosomal-subunit (LSU) proteome | 0.1 | Orthogroups_2024-Update | |
Sobic.006G221200.1 | No alias | component *(eL27) of large ribosomal-subunit (LSU) proteome | 0.1 | Orthogroups_2024-Update | |
Sobic.010G230700.1 | No alias | component *(eL27) of large ribosomal-subunit (LSU) proteome | 0.13 | Orthogroups_2024-Update | |
Solyc06g073300 | No alias | 60S ribosomal protein L27 (AHRD V3.3 *** A0A0V0HNB9_SOLCH) | 0.09 | Orthogroups_2024-Update | |
Solyc07g043360 | No alias | 60S ribosomal protein L27 (AHRD V3.3 *** K4CEJ5_SOLLC) | 0.05 | Orthogroups_2024-Update | |
Sopen06g029660 | No alias | Ribosomal L27e protein family | 0.12 | Orthogroups_2024-Update | |
Sopen07g022920 | No alias | Ribosomal L27e protein family | 0.1 | Orthogroups_2024-Update | |
evm.model.contig_2045.6 | No alias | (p41101|rl27_soltu : 144.0) 60S ribosomal protein L27 -... | 0.16 | Orthogroups_2024-Update | |
evm.model.tig00021275.23 | No alias | (at3g22230 : 163.0) Ribosomal L27e protein family;... | 0.09 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | 16Dec |
CC | GO:0005840 | ribosome | IEA | 16Dec |
BP | GO:0006412 | translation | IEA | 16Dec |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003746 | translation elongation factor activity | IEP | Predicted GO |
MF | GO:0004809 | tRNA (guanine-N2-)-methyltransferase activity | IEP | Predicted GO |
CC | GO:0005634 | nucleus | IEP | Predicted GO |
BP | GO:0006325 | chromatin organization | IEP | Predicted GO |
BP | GO:0006334 | nucleosome assembly | IEP | Predicted GO |
BP | GO:0006399 | tRNA metabolic process | IEP | Predicted GO |
BP | GO:0006414 | translational elongation | IEP | Predicted GO |
BP | GO:0006606 | protein import into nucleus | IEP | Predicted GO |
BP | GO:0006913 | nucleocytoplasmic transport | IEP | Predicted GO |
BP | GO:0008033 | tRNA processing | IEP | Predicted GO |
MF | GO:0008175 | tRNA methyltransferase activity | IEP | Predicted GO |
MF | GO:0009982 | pseudouridine synthase activity | IEP | Predicted GO |
BP | GO:0010206 | photosystem II repair | IEP | Predicted GO |
BP | GO:0010207 | photosystem II assembly | IEP | Predicted GO |
BP | GO:0016043 | cellular component organization | IEP | Predicted GO |
CC | GO:0016272 | prefoldin complex | IEP | Predicted GO |
MF | GO:0016423 | tRNA (guanine) methyltransferase activity | IEP | Predicted GO |
BP | GO:0017038 | protein import | IEP | Predicted GO |
BP | GO:0022607 | cellular component assembly | IEP | Predicted GO |
BP | GO:0030091 | protein repair | IEP | Predicted GO |
BP | GO:0034470 | ncRNA processing | IEP | Predicted GO |
BP | GO:0034504 | protein localization to nucleus | IEP | Predicted GO |
BP | GO:0034622 | cellular protein-containing complex assembly | IEP | Predicted GO |
BP | GO:0034660 | ncRNA metabolic process | IEP | Predicted GO |
BP | GO:0034728 | nucleosome organization | IEP | Predicted GO |
CC | GO:0043227 | membrane-bounded organelle | IEP | Predicted GO |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Predicted GO |
BP | GO:0043933 | protein-containing complex subunit organization | IEP | Predicted GO |
BP | GO:0051169 | nuclear transport | IEP | Predicted GO |
BP | GO:0051170 | import into nucleus | IEP | Predicted GO |
MF | GO:0061608 | nuclear import signal receptor activity | IEP | Predicted GO |
BP | GO:0065003 | protein-containing complex assembly | IEP | Predicted GO |
BP | GO:0065004 | protein-DNA complex assembly | IEP | Predicted GO |
BP | GO:0071824 | protein-DNA complex subunit organization | IEP | Predicted GO |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | Predicted GO |
MF | GO:0140104 | molecular carrier activity | IEP | Predicted GO |
MF | GO:0140142 | nucleocytoplasmic carrier activity | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001141 | Ribosomal_L27e | 52 | 135 |
No external refs found! |