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  5. Brara.A02819.1

Brara.A02819.1


Description : regulatory protein *(COB) of cellulose-hemicellulose network assembly


Gene families : OG_42_0001403 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001403_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.A02819.1
Cluster HCAA Clusters: Cluster_394

Target Alias Description ECC score Gene Family Method Actions
126731 No alias COBRA-like protein-7 precursor 0.02 Orthogroups_2024-Update
A4A49_03530 No alias cobra-like protein 7 0.03 Orthogroups_2024-Update
A4A49_09118 No alias cobra-like protein 10 0.01 Orthogroups_2024-Update
GRMZM2G056627 No alias COBRA-like protein 10 precursor 0.03 Orthogroups_2024-Update
Glyma.09G039900 No alias COBRA-like protein-7 precursor 0.03 Orthogroups_2024-Update
Glyma.13G288300 No alias COBRA-like protein 10 precursor 0.03 Orthogroups_2024-Update
Pp1s233_99V6 No alias protein cobra 0.02 Orthogroups_2024-Update
Pp1s263_89V6 No alias COBRA-like protein 7 precursor [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Pp1s277_94V6 No alias FCAALL.104; phytochelatin synthetase-related... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0010215 cellulose microfibril organization IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Predicted GO
MF GO:0003678 DNA helicase activity IEP Predicted GO
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predicted GO
MF GO:0004386 helicase activity IEP Predicted GO
MF GO:0004866 endopeptidase inhibitor activity IEP Predicted GO
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Predicted GO
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0030414 peptidase inhibitor activity IEP Predicted GO
MF GO:0030570 pectate lyase activity IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
BP GO:0032200 telomere organization IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
BP GO:0060249 anatomical structure homeostasis IEP Predicted GO
MF GO:0061134 peptidase regulator activity IEP Predicted GO
MF GO:0061135 endopeptidase regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR006918 COBRA_pln 245 424
No external refs found!