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  5. Brara.A02980.1

Brara.A02980.1


Description : cyclic nucleotide-gated cation channel *(CNGC)


Gene families : OG_42_0000108 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000108_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.A02980.1
Cluster HCAA Clusters: Cluster_142

Target Alias Description ECC score Gene Family Method Actions
A4A49_20339 No alias cyclic nucleotide-gated ion channel 4 0.05 Orthogroups_2024-Update
A4A49_22015 No alias putative cyclic nucleotide-gated ion channel 15 0.03 Orthogroups_2024-Update
A4A49_24346 No alias cyclic nucleotide-gated ion channel 2 0.06 Orthogroups_2024-Update
At2g46440 No alias Cyclic nucleotide-gated ion channel 11... 0.03 Orthogroups_2024-Update
Brara.B01426.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.04 Orthogroups_2024-Update
Brara.C03656.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.03 Orthogroups_2024-Update
Brara.E02422.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.03 Orthogroups_2024-Update
Brara.I04513.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.04 Orthogroups_2024-Update
Brara.J00905.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.03 Orthogroups_2024-Update
Brara.K00815.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.03 Orthogroups_2024-Update
Glyma.16G025400 No alias cyclic nucleotide-gated channel 13 0.02 Orthogroups_2024-Update
HORVU1Hr1G065990.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU7Hr1G079410.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.02 Orthogroups_2024-Update
MA_167620g0010 No alias (at5g15410 : 804.0) 'defense, no death' gene (DND1)... 0.04 Orthogroups_2024-Update
Potri.014G097900 No alias cyclic nucleotide gated channel 1 0.03 Orthogroups_2024-Update
Potri.015G033900 No alias cyclic nucleotide-binding transporter 1 0.02 Orthogroups_2024-Update
Potri.018G009200 No alias cyclic nucleotide-gated channel 14 0.03 Orthogroups_2024-Update
Seita.9G156700.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.02 Orthogroups_2024-Update
Sobic.001G155100.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.02 Orthogroups_2024-Update
Sopen02g033280 No alias Cyclic nucleotide-binding domain 0.03 Orthogroups_2024-Update
Sopen05g028790 No alias Ion transport protein 0.02 Orthogroups_2024-Update
Sopen08g022780 No alias Ion transport protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA 16Dec
BP GO:0006811 ion transport IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
MF GO:0008430 selenium binding IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 202 514
No external refs found!