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  5. Brara.A02981.1

Brara.A02981.1


Description : cyclic nucleotide-gated cation channel *(CNGC)


Gene families : OG_42_0000108 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000108_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.A02981.1
Cluster HCAA Clusters: Cluster_363

Target Alias Description ECC score Gene Family Method Actions
A4A49_20339 No alias cyclic nucleotide-gated ion channel 4 0.03 Orthogroups_2024-Update
At5g54250 No alias Cyclic nucleotide-gated ion channel 4... 0.03 Orthogroups_2024-Update
Bradi2g20660 No alias cyclic nucleotide-gated cation channel 4 0.03 Orthogroups_2024-Update
Bradi3g49290 No alias cyclic nucleotide-gated channel 15 0.03 Orthogroups_2024-Update
GRMZM2G023037 No alias cyclic nucleotide gated channel 8 0.02 Orthogroups_2024-Update
GRMZM2G074317 No alias Cyclic nucleotide-regulated ion channel family protein 0.03 Orthogroups_2024-Update
Glyma.03G257133 No alias cyclic nucleotide gated channel 1 0.03 Orthogroups_2024-Update
HORVU5Hr1G065950.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.04 Orthogroups_2024-Update
LOC_Os03g55100 No alias cyclic nucleotide-gated ion channel 2, putative, expressed 0.04 Orthogroups_2024-Update
PSME_00005940-RA No alias (at5g15410 : 820.0) 'defense, no death' gene (DND1)... 0.03 Orthogroups_2024-Update
Potri.014G097900 No alias cyclic nucleotide gated channel 1 0.03 Orthogroups_2024-Update
Potri.017G089900 No alias Cyclic nucleotide-regulated ion channel family protein 0.03 Orthogroups_2024-Update
Potri.018G009200 No alias cyclic nucleotide-gated channel 14 0.05 Orthogroups_2024-Update
Seita.3G188100.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.03 Orthogroups_2024-Update
Seita.8G054900.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.03 Orthogroups_2024-Update
Sopen08g022780 No alias Ion transport protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA 16Dec
BP GO:0006811 ion transport IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0005092 GDP-dissociation inhibitor activity IEP Predicted GO
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0007264 small GTPase mediated signal transduction IEP Predicted GO
BP GO:0007265 Ras protein signal transduction IEP Predicted GO
BP GO:0007266 Rho protein signal transduction IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 184 500
No external refs found!