Description : ATL8 [Source:UniProtKB/TrEMBL;Acc:A0A178WF21]
Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Arabidopsis release: At1g76410 | |
Cluster | HCCA clusters: Cluster_4 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
438800 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
59303 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
A4A49_10724 | No alias | ring-h2 finger protein atl33 | 0.02 | Orthogroups_2024-Update | |
A4A49_19370 | No alias | ring-h2 finger protein atl70 | 0.03 | Orthogroups_2024-Update | |
At4g40070 | No alias | RING-H2 finger protein ATL32... | 0.03 | Orthogroups_2024-Update | |
Bradi2g22650 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
Bradi3g44733 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
Bradi3g60770 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
Brara.A02911.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
Brara.B02994.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
Brara.B03540.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
Brara.G00267.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
GRMZM2G447566 | No alias | RING/U-box superfamily protein | 0.04 | Orthogroups_2024-Update | |
HORVU3Hr1G028260.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
HORVU7Hr1G121010.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
Kfl00066_0030 | kfl00066_0030_v1.1 | (at1g23980 : 83.2) RING/U-box superfamily protein;... | 0.02 | Orthogroups_2024-Update | |
LOC_Os11g39640 | No alias | zinc finger, C3HC4 type domain containing protein, expressed | 0.02 | Orthogroups_2024-Update | |
Potri.010G235200 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
Potri.019G043900 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
Pp1s20_280V6 | No alias | ring finger | 0.02 | Orthogroups_2024-Update | |
Seita.1G270700.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
Seita.5G363700.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
Seita.7G110600.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
Sobic.004G283400.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
Sobic.009G168900.1 | No alias | Unknown function | 0.05 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | Predicted GO |
MF | GO:0003723 | RNA binding | IEP | Predicted GO |
MF | GO:0003746 | translation elongation factor activity | IEP | Predicted GO |
MF | GO:0003747 | translation release factor activity | IEP | Predicted GO |
MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | Predicted GO |
MF | GO:0004175 | endopeptidase activity | IEP | Predicted GO |
MF | GO:0004252 | serine-type endopeptidase activity | IEP | Predicted GO |
MF | GO:0004332 | fructose-bisphosphate aldolase activity | IEP | Predicted GO |
MF | GO:0005092 | GDP-dissociation inhibitor activity | IEP | Predicted GO |
MF | GO:0005094 | Rho GDP-dissociation inhibitor activity | IEP | Predicted GO |
MF | GO:0005199 | structural constituent of cell wall | IEP | Predicted GO |
CC | GO:0005737 | cytoplasm | IEP | Predicted GO |
BP | GO:0006260 | DNA replication | IEP | Predicted GO |
BP | GO:0006310 | DNA recombination | IEP | Predicted GO |
BP | GO:0006413 | translational initiation | IEP | Predicted GO |
BP | GO:0006414 | translational elongation | IEP | Predicted GO |
BP | GO:0006415 | translational termination | IEP | Predicted GO |
MF | GO:0008079 | translation termination factor activity | IEP | Predicted GO |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | Predicted GO |
MF | GO:0008236 | serine-type peptidase activity | IEP | Predicted GO |
BP | GO:0009664 | plant-type cell wall organization | IEP | Predicted GO |
MF | GO:0016832 | aldehyde-lyase activity | IEP | Predicted GO |
MF | GO:0016859 | cis-trans isomerase activity | IEP | Predicted GO |
MF | GO:0017171 | serine hydrolase activity | IEP | Predicted GO |
BP | GO:0018208 | peptidyl-proline modification | IEP | Predicted GO |
BP | GO:0022411 | cellular component disassembly | IEP | Predicted GO |
MF | GO:0030695 | GTPase regulator activity | IEP | Predicted GO |
BP | GO:0032984 | protein-containing complex disassembly | IEP | Predicted GO |
BP | GO:0043624 | cellular protein complex disassembly | IEP | Predicted GO |
MF | GO:0060589 | nucleoside-triphosphatase regulator activity | IEP | Predicted GO |
BP | GO:0071669 | plant-type cell wall organization or biogenesis | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001841 | Znf_RING | 103 | 146 |
No external refs found! |