At1g76420

Description : Protein CUP-SHAPED COTYLEDON 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9S851]

Gene families : OG_42_0000017 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000017_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Arabidopsis release: At1g76420
Cluster	HCCA clusters: Cluster_209

Target	Alias	Description	ECC score	Gene Family Method
A4A49_37618	No alias	nac domain-containing protein 86	0.02	Orthogroups_2024-Update
At2g24430	No alias	NAC domain containing protein 38...	0.03	Orthogroups_2024-Update
At3g18400	No alias	NAC domain containing protein 58...	0.03	Orthogroups_2024-Update
Brara.B00763.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Brara.B01634.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Brara.I02675.1	No alias	NAC-type transcription factor	0.04	Orthogroups_2024-Update
Glyma.07G050600	No alias	NAC (No Apical Meristem) domain transcriptional...	0.03	Orthogroups_2024-Update
Glyma.16G152100	No alias	Arabidopsis NAC domain containing protein 87	0.03	Orthogroups_2024-Update
PSME_00006177-RA	No alias	(at5g53950 : 292.0) Transcriptional activator of the NAC...	0.03	Orthogroups_2024-Update
PSME_00009079-RA	No alias	(at1g65910 : 290.0) NAC domain containing protein 28...	0.02	Orthogroups_2024-Update
PSME_00014399-RA	No alias	(at5g53950 : 274.0) Transcriptional activator of the NAC...	0.03	Orthogroups_2024-Update
Potri.001G144400	No alias	NAC domain containing protein 96	0.03	Orthogroups_2024-Update
Potri.010G229900	No alias	NAC domain containing protein 2	0.03	Orthogroups_2024-Update
Pp1s42_248V6	No alias	nac domain-containing	0.03	Orthogroups_2024-Update
Solyc06g069710	No alias	NAC domain protein, (AHRD V3.3 *** A0A061FWI7_THECC)	0.03	Orthogroups_2024-Update
Solyc06g074170	No alias	NAC domain protein, (AHRD V3.3 *** A0A061GVZ7_THECC)	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0004497	monooxygenase activity	IEP	Predicted GO
MF	GO:0004499	N,N-dimethylaniline monooxygenase activity	IEP	Predicted GO
MF	GO:0004609	phosphatidylserine decarboxylase activity	IEP	Predicted GO
MF	GO:0005215	transporter activity	IEP	Predicted GO
BP	GO:0006810	transport	IEP	Predicted GO
BP	GO:0008654	phospholipid biosynthetic process	IEP	Predicted GO
MF	GO:0016709	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	IEP	Predicted GO
MF	GO:0016831	carboxy-lyase activity	IEP	Predicted GO
MF	GO:0022804	active transmembrane transporter activity	IEP	Predicted GO
MF	GO:0022857	transmembrane transporter activity	IEP	Predicted GO
BP	GO:0051179	localization	IEP	Predicted GO
BP	GO:0051234	establishment of localization	IEP	Predicted GO
BP	GO:0055085	transmembrane transport	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003441	NAC-dom	23	149

External Links

No external refs found!

At1g76420

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation