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  5. Brara.A03020.1

Brara.A03020.1


Description : bHLH-type transcription factor


Gene families : OG_42_0001320 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001320_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.A03020.1
Cluster HCAA Clusters: Cluster_130

Target Alias Description ECC score Gene Family Method Actions
Glyma.10G146300 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
HORVU0Hr1G008050.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os01g14110 No alias expressed protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Predicted GO
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0003743 translation initiation factor activity IEP Predicted GO
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0005542 folic acid binding IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
BP GO:0010206 photosystem II repair IEP Predicted GO
BP GO:0010207 photosystem II assembly IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
BP GO:0030091 protein repair IEP Predicted GO
MF GO:0031406 carboxylic acid binding IEP Predicted GO
MF GO:0033218 amide binding IEP Predicted GO
MF GO:0043177 organic acid binding IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
MF GO:0072341 modified amino acid binding IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!