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  5. Brara.A03039.1

Brara.A03039.1


Description : subgroup ERF-VII transcription factor & transcription factor component *(HRE/RAP2.12) of oxygen-sensor activity


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.A03039.1
Cluster HCAA Clusters: Cluster_375

Target Alias Description ECC score Gene Family Method Actions
A4A49_06467 No alias ethylene-responsive transcription factor crf4 0.03 Orthogroups_2024-Update
At5g19790 No alias Ethylene-responsive transcription factor RAP2-11... 0.03 Orthogroups_2024-Update
At5g61590 No alias Ethylene-responsive transcription factor ERF107... 0.04 Orthogroups_2024-Update
Bradi2g56145 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Brara.A00511.1 No alias subgroup ERF-III transcription factor 0.03 Orthogroups_2024-Update
Brara.A00881.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
Brara.A03203.1 No alias subgroup ERF-VII transcription factor & transcription... 0.03 Orthogroups_2024-Update
Brara.A03436.1 No alias subgroup ERF-IV/DREB2 transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G039112 No alias related to AP2 11 0.02 Orthogroups_2024-Update
GRMZM2G175543 No alias ethylene responsive element binding factor 4 0.02 Orthogroups_2024-Update
Glyma.03G255500 No alias cytokinin response factor 4 0.03 Orthogroups_2024-Update
Glyma.04G041200 No alias DREB and EAR motif protein 3 0.03 Orthogroups_2024-Update
Glyma.04G103900 No alias related to AP2 4 0.03 Orthogroups_2024-Update
Glyma.05G214400 No alias cytokinin response factor 2 0.03 Orthogroups_2024-Update
Glyma.06G290000 No alias erf domain protein 9 0.03 Orthogroups_2024-Update
Glyma.10G036700 No alias ethylene response factor 1 0.02 Orthogroups_2024-Update
Glyma.10G067000 No alias C-repeat/DRE binding factor 1 0.03 Orthogroups_2024-Update
Glyma.13G081600 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
HORVU4Hr1G079630.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
HORVU5Hr1G080340.1 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os01g58420 No alias AP2 domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os05g37640 No alias expressed protein 0.03 Orthogroups_2024-Update
MA_2446g0010 No alias (at2g20880 : 136.0) Integrase-type DNA-binding... 0.02 Orthogroups_2024-Update
MA_4032g0010 No alias (q9sxs8|erf3_tobac : 85.1) Ethylene-responsive... 0.02 Orthogroups_2024-Update
Mp7g00860.1 No alias transcription factor (DREB) 0.02 Orthogroups_2024-Update
PSME_00009547-RA No alias (at4g17500 : 103.0) Encodes a member of the ERF... 0.03 Orthogroups_2024-Update
PSME_00016017-RA No alias (at5g25190 : 150.0) encodes a member of the ERF... 0.03 Orthogroups_2024-Update
PSME_00022946-RA No alias (at5g61890 : 105.0) encodes a member of the ERF... 0.02 Orthogroups_2024-Update
PSME_00037533-RA No alias (at5g61890 : 108.0) encodes a member of the ERF... 0.04 Orthogroups_2024-Update
Potri.001G155700 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.001G181500 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.002G043300 No alias erf domain protein 9 0.04 Orthogroups_2024-Update
Potri.002G124000 No alias related to AP2 1 0.04 Orthogroups_2024-Update
Potri.002G153500 No alias related to AP2 11 0.05 Orthogroups_2024-Update
Potri.003G179900 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Potri.005G219600 No alias ethylene responsive element binding factor 3 0.03 Orthogroups_2024-Update
Potri.014G046800 No alias ethylene-responsive element binding factor 13 0.03 Orthogroups_2024-Update
Pp1s276_72V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Pp1s487_24V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Seita.1G323500.1 No alias subgroup ERF-I transcription factor 0.03 Orthogroups_2024-Update
Seita.9G516500.1 No alias subgroup ERF-VII transcription factor 0.03 Orthogroups_2024-Update
Sobic.001G002500.1 No alias subgroup ERF-IX transcription factor 0.04 Orthogroups_2024-Update
Sobic.004G084600.1 No alias cutin and suberin biosynthesis transcription factor... 0.02 Orthogroups_2024-Update
Sobic.005G014800.1 No alias transcription factor *(CRF) & subgroup ERF-VI... 0.03 Orthogroups_2024-Update
Sobic.006G184700.1 No alias subgroup ERF-III transcription factor 0.02 Orthogroups_2024-Update
Sobic.009G111200.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc03g120840 No alias ethylene-responsive transcription factor (AHRD V3.3 *-*... 0.03 Orthogroups_2024-Update
Solyc05g013540 No alias Ethylene-responsive transcription factor (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc07g064890 No alias Ethylene Response Factor F.2 0.03 Orthogroups_2024-Update
Sopen11g007720 No alias AP2 domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA 16Dec
BP GO:0006355 regulation of transcription, DNA-templated IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Predicted GO
BP GO:0000226 microtubule cytoskeleton organization IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Predicted GO
CC GO:0005672 transcription factor TFIIA complex IEP Predicted GO
CC GO:0005875 microtubule associated complex IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
BP GO:0006479 protein methylation IEP Predicted GO
BP GO:0006606 protein import into nucleus IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
BP GO:0006913 nucleocytoplasmic transport IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
BP GO:0007051 spindle organization IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008200 ion channel inhibitor activity IEP Predicted GO
BP GO:0008213 protein alkylation IEP Predicted GO
MF GO:0008276 protein methyltransferase activity IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
MF GO:0008509 anion transmembrane transporter activity IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Predicted GO
BP GO:0015931 nucleobase-containing compound transport IEP Predicted GO
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predicted GO
MF GO:0016247 channel regulator activity IEP Predicted GO
MF GO:0016248 channel inhibitor activity IEP Predicted GO
MF GO:0016278 lysine N-methyltransferase activity IEP Predicted GO
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
BP GO:0016571 histone methylation IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
BP GO:0017038 protein import IEP Predicted GO
MF GO:0017080 sodium channel regulator activity IEP Predicted GO
BP GO:0018022 peptidyl-lysine methylation IEP Predicted GO
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Predicted GO
BP GO:0018205 peptidyl-lysine modification IEP Predicted GO
MF GO:0019871 sodium channel inhibitor activity IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
BP GO:0034504 protein localization to nucleus IEP Predicted GO
BP GO:0034968 histone lysine methylation IEP Predicted GO
MF GO:0042054 histone methyltransferase activity IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
BP GO:0051169 nuclear transport IEP Predicted GO
BP GO:0051170 import into nucleus IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051225 spindle assembly IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
MF GO:0061608 nuclear import signal receptor activity IEP Predicted GO
CC GO:0070652 HAUS complex IEP Predicted GO
BP GO:0070925 organelle assembly IEP Predicted GO
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
MF GO:0099106 ion channel regulator activity IEP Predicted GO
MF GO:0140104 molecular carrier activity IEP Predicted GO
MF GO:0140142 nucleocytoplasmic carrier activity IEP Predicted GO
BP GO:1901264 carbohydrate derivative transport IEP Predicted GO
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 81 130
No external refs found!