Brara.A03091.1

Description : subunit beta2 of coat protein complex

Gene families : OG_42_0001146 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001146_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.A03091.1
Cluster	HCAA Clusters: Cluster_150

Target	Alias	Description	ECC score	Gene Family Method
At1g52360	No alias	Coatomer subunit beta' [Source:UniProtKB/TrEMBL;Acc:F4ICX0]	0.03	Orthogroups_2024-Update
Bradi3g07926	No alias	Coatomer, beta\' subunit	0.03	Orthogroups_2024-Update
Pp1s243_63V6	No alias	coatomer beta	0.02	Orthogroups_2024-Update
Pp1s61_1V6	No alias	coatomer beta	0.02	Orthogroups_2024-Update
Solyc06g066730	No alias	Coatomer beta subunit, putative (AHRD V3.3 *** B9SQC0_RICCO)	0.03	Orthogroups_2024-Update
evm.model.contig_4516.1	No alias	(at1g79990 : 963.0) structural molecules; FUNCTIONS IN:...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005198	structural molecule activity	IEA	16Dec
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	16Dec
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	16Dec
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0015833	peptide transport	None	Extended
BP	GO:0016192	vesicle-mediated transport	IEA	16Dec
CC	GO:0030117	membrane coat	IEA	16Dec
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0042886	amide transport	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044425	membrane part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004190	aspartic-type endopeptidase activity	IEP	Predicted GO
MF	GO:0004869	cysteine-type endopeptidase inhibitor activity	IEP	Predicted GO
MF	GO:0008417	fucosyltransferase activity	IEP	Predicted GO
CC	GO:0016020	membrane	IEP	Predicted GO
MF	GO:0032182	ubiquitin-like protein binding	IEP	Predicted GO
MF	GO:0043130	ubiquitin binding	IEP	Predicted GO
MF	GO:0070001	aspartic-type peptidase activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR006692	Coatomer_WD-assoc_reg	319	763
IPR001680	WD40_repeat	91	127
IPR001680	WD40_repeat	59	85
IPR001680	WD40_repeat	132	171
IPR001680	WD40_repeat	177	215
IPR001680	WD40_repeat	220	256

External Links

No external refs found!