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  5. Brara.A03238.1

Brara.A03238.1


Description : B-G-class Rab-GDF protein


Gene families : OG_42_0000375 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000375_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.A03238.1
Cluster HCAA Clusters: Cluster_244

Target Alias Description ECC score Gene Family Method Actions
Bradi2g53810 No alias prenylated RAB acceptor 1.B4 0.02 Orthogroups_2024-Update
GRMZM2G147862 No alias prenylated RAB acceptor 1.E 0.03 Orthogroups_2024-Update
Pp1s257_28V6 No alias T3G21.15; prenylated rab acceptor (PRA1) family protein... 0.03 Orthogroups_2024-Update
Seita.5G366000.1 No alias B-G-class Rab-GDF protein 0.02 Orthogroups_2024-Update
Sobic.001G055600.1 No alias B-G-class Rab-GDF protein 0.04 Orthogroups_2024-Update
Sobic.009G074100.2 No alias B-G-class Rab-GDF protein 0.02 Orthogroups_2024-Update
Solyc06g050570 No alias PRA1 family protein (AHRD V3.3 *** K4C5K1_SOLLC) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000149 SNARE binding IEP Predicted GO
CC GO:0000808 origin recognition complex IEP Predicted GO
BP GO:0006099 tricarboxylic acid cycle IEP Predicted GO
BP GO:0006101 citrate metabolic process IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
BP GO:0006488 dolichol-linked oligosaccharide biosynthetic process IEP Predicted GO
BP GO:0006490 oligosaccharide-lipid intermediate biosynthetic process IEP Predicted GO
BP GO:0016999 antibiotic metabolic process IEP Predicted GO
MF GO:0019905 syntaxin binding IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004895 Prenylated_rab_accept_PRA1 36 184
No external refs found!