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  5. Brara.A03289.1

Brara.A03289.1


Description : subfamily ABCC transporter


Gene families : OG_42_0000076 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000076_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.A03289.1
Cluster HCAA Clusters: Cluster_287

Target Alias Description ECC score Gene Family Method Actions
171469 No alias multidrug resistance-associated protein 6 0.02 Orthogroups_2024-Update
At2g07680 No alias multidrug resistance-associated protein 11... 0.03 Orthogroups_2024-Update
Bradi1g75590 No alias multidrug resistance-associated protein 5 0.02 Orthogroups_2024-Update
Brara.I04331.1 No alias subfamily ABCC transporter 0.03 Orthogroups_2024-Update
Kfl00085_0340 kfl00085_0340_v1.1 (at2g34660 : 585.0) encodes a multidrug... 0.01 Orthogroups_2024-Update
LOC_Os02g18670 No alias ABC transporter family protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g52900 No alias ABC transporter family protein, putative, expressed 0.03 Orthogroups_2024-Update
Mp4g11930.1 No alias subfamily ABCC transporter 0.02 Orthogroups_2024-Update
PSME_00045048-RA No alias (at2g47800 : 243.0) Encodes a plasma membrane localized... 0.01 Orthogroups_2024-Update
Potri.001G362300 No alias multidrug resistance-associated protein 3 0.05 Orthogroups_2024-Update
Seita.4G066400.1 No alias subfamily ABCC transporter 0.02 Orthogroups_2024-Update
Seita.7G040200.1 No alias subfamily ABCC transporter 0.02 Orthogroups_2024-Update
Sobic.003G049500.2 No alias subfamily ABCC transporter 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
MF GO:0005102 signaling receptor binding IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
MF GO:0008083 growth factor activity IEP Predicted GO
BP GO:0008283 cell proliferation IEP Predicted GO
BP GO:0009314 response to radiation IEP Predicted GO
BP GO:0009416 response to light stimulus IEP Predicted GO
BP GO:0009581 detection of external stimulus IEP Predicted GO
BP GO:0009582 detection of abiotic stimulus IEP Predicted GO
BP GO:0009583 detection of light stimulus IEP Predicted GO
BP GO:0009584 detection of visible light IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
MF GO:0030545 receptor regulator activity IEP Predicted GO
CC GO:0031012 extracellular matrix IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0040008 regulation of growth IEP Predicted GO
CC GO:0044421 extracellular region part IEP Predicted GO
BP GO:0045927 positive regulation of growth IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
MF GO:0048018 receptor ligand activity IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0051606 detection of stimulus IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 628 762
IPR003439 ABC_transporter-like 1250 1398
IPR011527 ABC1_TM_dom 298 563
IPR011527 ABC1_TM_dom 917 1157
No external refs found!