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  5. Brara.A03323.1

Brara.A03323.1


Description : Fasciclin-type arabinogalactan protein


Gene families : OG_42_0000318 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000318_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.A03323.1
Cluster HCAA Clusters: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
A4A49_38300 No alias fasciclin-like arabinogalactan protein 2 0.04 Orthogroups_2024-Update
At3g12660 No alias Fasciclin-like arabinogalactan protein 14... 0.03 Orthogroups_2024-Update
Bradi4g34420 No alias FASCICLIN-like arabinogalactan 2 0.02 Orthogroups_2024-Update
Brara.C02483.1 No alias Fasciclin-type arabinogalactan protein 0.04 Orthogroups_2024-Update
GRMZM2G035933 No alias Fasciclin-like arabinogalactan family protein 0.03 Orthogroups_2024-Update
GRMZM2G109291 No alias FASCICLIN-like arabinogalactan protein 3 precursor 0.03 Orthogroups_2024-Update
LOC_Os04g21570 No alias fasciclin-like arabinogalactan precursor protein,... 0.02 Orthogroups_2024-Update
PSME_00037137-RA No alias (at2g45470 : 298.0) FASCICLIN-like arabinogalactan... 0.04 Orthogroups_2024-Update
Potri.014G168100 No alias FASCICLIN-like arabinogalactan 2 0.04 Orthogroups_2024-Update
Sobic.009G055900.1 No alias Fasciclin-type arabinogalactan protein 0.03 Orthogroups_2024-Update
Solyc10g005960 No alias Fasciclin-like arabinogalactan protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc12g006110 No alias Fasciclin-like arabinogalactan protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003997 acyl-CoA oxidase activity IEP Predicted GO
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP Predicted GO
CC GO:0005777 peroxisome IEP Predicted GO
BP GO:0006450 regulation of translational fidelity IEP Predicted GO
BP GO:0006635 fatty acid beta-oxidation IEP Predicted GO
MF GO:0008200 ion channel inhibitor activity IEP Predicted GO
BP GO:0009062 fatty acid catabolic process IEP Predicted GO
BP GO:0016042 lipid catabolic process IEP Predicted GO
BP GO:0016054 organic acid catabolic process IEP Predicted GO
MF GO:0016247 channel regulator activity IEP Predicted GO
MF GO:0016248 channel inhibitor activity IEP Predicted GO
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0017080 sodium channel regulator activity IEP Predicted GO
BP GO:0019395 fatty acid oxidation IEP Predicted GO
MF GO:0019871 sodium channel inhibitor activity IEP Predicted GO
BP GO:0030258 lipid modification IEP Predicted GO
BP GO:0034440 lipid oxidation IEP Predicted GO
CC GO:0042579 microbody IEP Predicted GO
BP GO:0044242 cellular lipid catabolic process IEP Predicted GO
BP GO:0046395 carboxylic acid catabolic process IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
BP GO:0072329 monocarboxylic acid catabolic process IEP Predicted GO
MF GO:0099106 ion channel regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000782 FAS1_domain 36 110
No external refs found!