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  5. Brara.A03392.1

Brara.A03392.1


Description : Fasciclin-type arabinogalactan protein


Gene families : OG_42_0002109 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002109_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.A03392.1
Cluster HCAA Clusters: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
54466 No alias FASCICLIN-like arabinogalactan protein 17 precursor 0.02 Orthogroups_2024-Update
A4A49_13417 No alias fasciclin-like arabinogalactan protein 17 0.03 Orthogroups_2024-Update
At3g11700 No alias FLA18 [Source:UniProtKB/TrEMBL;Acc:A0A178VEM3] 0.03 Orthogroups_2024-Update
Bradi1g06290 No alias FASCICLIN-like arabinogalactan protein 16 precursor 0.04 Orthogroups_2024-Update
Brara.E02909.1 No alias Fasciclin-type arabinogalactan protein 0.03 Orthogroups_2024-Update
Glyma.06G308600 No alias FASCICLIN-like arabinogalactan protein 16 precursor 0.03 Orthogroups_2024-Update
LOC_Os03g57460 No alias fasciclin domain containing protein, expressed 0.04 Orthogroups_2024-Update
PSME_00051048-RA No alias (at5g06390 : 407.0) FASCICLIN-like arabinogalactan... 0.04 Orthogroups_2024-Update
Pp1s402_51V6 No alias MHF15.9; expressed protein [Arabidopsis thaliana] 0.03 Orthogroups_2024-Update
Pp1s88_59V6 No alias beta-ig-h3 domain-containing expressed 0.02 Orthogroups_2024-Update
Seita.2G038200.1 No alias Fasciclin-type arabinogalactan protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000030 mannosyltransferase activity IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Predicted GO
BP GO:0015693 magnesium ion transport IEP Predicted GO
BP GO:0015936 coenzyme A metabolic process IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0070838 divalent metal ion transport IEP Predicted GO
BP GO:0072511 divalent inorganic cation transport IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000782 FAS1_domain 54 189
IPR000782 FAS1_domain 299 419
No external refs found!