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  5. Brara.A03395.1

Brara.A03395.1


Description : Unknown function


Gene families : OG_42_0000387 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000387_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.A03395.1
Cluster HCAA Clusters: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
Glyma.02G197600 No alias NDR1/HIN1-like 1 0.03 Orthogroups_2024-Update
HORVU7Hr1G119760.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os04g58860 No alias harpin-induced protein 1 domain containing protein, expressed 0.03 Orthogroups_2024-Update
MA_7708687g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Potri.006G204200 No alias NDR1/HIN1-like 1 0.03 Orthogroups_2024-Update
Potri.012G006000 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.03 Orthogroups_2024-Update
Pp1s427_21V6 No alias hypothetical protein similar to Oryza sativa chromosome... 0.05 Orthogroups_2024-Update
Seita.6G003000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.9G299700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.008G043500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen06g030460 No alias Late embryogenesis abundant protein 0.03 Orthogroups_2024-Update
Sopen11g027580 No alias Late embryogenesis abundant protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
CC GO:0005669 transcription factor TFIID complex IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
InterPro domains Description Start Stop
IPR004864 LEA_2 76 179
No external refs found!