Brara.A03436.1

Description : subgroup ERF-IV/DREB2 transcription factor

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.A03436.1
Cluster	HCAA Clusters: Cluster_78

Target	Alias	Description	ECC score	Gene Family Method
A4A49_08495	No alias	ethylene-responsive transcription factor 3	0.01	Orthogroups_2024-Update
A4A49_16905	No alias	ethylene-responsive transcription factor 5	0.01	Orthogroups_2024-Update
A4A49_18156	No alias	ethylene-responsive transcription factor shine 3	0.03	Orthogroups_2024-Update
A4A49_20472	No alias	ethylene-responsive transcription factor 13	0.01	Orthogroups_2024-Update
A4A49_21566	No alias	ethylene-responsive transcription factor erf087	0.03	Orthogroups_2024-Update
A4A49_39806	No alias	ethylene-responsive transcription factor erf119	0.02	Orthogroups_2024-Update
At1g28360	No alias	Ethylene-responsive transcription factor 12...	0.01	Orthogroups_2024-Update
At2g40350	No alias	Integrase-type DNA-binding superfamily protein...	0.03	Orthogroups_2024-Update
At3g11020	No alias	Dehydration-responsive element-binding protein 2B...	0.02	Orthogroups_2024-Update
At3g61630	No alias	CRF6 [Source:UniProtKB/TrEMBL;Acc:A0A178VFH2]	0.02	Orthogroups_2024-Update
At4g25480	No alias	Dehydration-responsive element-binding protein 1A...	0.02	Orthogroups_2024-Update
At5g05410	No alias	Dehydration-responsive element-binding protein 2A...	0.02	Orthogroups_2024-Update
Bradi1g04110	No alias	cytokinin response factor 4	0.02	Orthogroups_2024-Update
Bradi2g56145	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Bradi5g17620	No alias	Integrase-type DNA-binding superfamily protein	0.01	Orthogroups_2024-Update
Brara.A01860.1	No alias	subgroup ERF-III transcription factor	0.01	Orthogroups_2024-Update
Brara.A03039.1	No alias	subgroup ERF-VII transcription factor & transcription...	0.02	Orthogroups_2024-Update
Brara.A03203.1	No alias	subgroup ERF-VII transcription factor & transcription...	0.01	Orthogroups_2024-Update
Brara.B00174.1	No alias	subgroup ERF-IV/DREB2 transcription factor	0.02	Orthogroups_2024-Update
Brara.B01950.1	No alias	transcription factor *(CRF) & subgroup ERF-VI...	0.01	Orthogroups_2024-Update
Brara.B03207.1	No alias	transcription factor *(CRF) & subgroup ERF-VI...	0.03	Orthogroups_2024-Update
Brara.C00977.1	No alias	subgroup ERF-II transcription factor *(ERF16/17/18)	0.01	Orthogroups_2024-Update
Brara.C03562.1	No alias	subgroup ERF-VIII transcription factor	0.01	Orthogroups_2024-Update
Brara.D00707.1	No alias	subgroup ERF-I transcription factor	0.02	Orthogroups_2024-Update
Brara.D01564.1	No alias	subgroup ERF-III transcription factor	0.02	Orthogroups_2024-Update
Brara.E00471.1	No alias	subgroup ERF-III transcription factor	0.01	Orthogroups_2024-Update
Brara.E02172.1	No alias	subgroup ERF-VIII transcription factor	0.03	Orthogroups_2024-Update
Brara.F00298.1	No alias	subgroup ERF-VIII transcription factor	0.01	Orthogroups_2024-Update
Brara.G02253.1	No alias	subgroup ERF-II transcription factor *(ERF16/17/18)	0.02	Orthogroups_2024-Update
Brara.H01375.1	No alias	Unknown function	0.01	Orthogroups_2024-Update
Brara.H02645.1	No alias	subgroup ERF-III transcription factor	0.02	Orthogroups_2024-Update
GRMZM2G020016	No alias	ERF domain protein 12	0.04	Orthogroups_2024-Update
GRMZM2G438202	No alias	ethylene responsive element binding factor 4	0.05	Orthogroups_2024-Update
Glyma.04G067200	No alias	Integrase-type DNA-binding superfamily protein	0.06	Orthogroups_2024-Update
Glyma.05G157400	No alias	related to AP2 11	0.01	Orthogroups_2024-Update
Glyma.06G125100	No alias	cytokinin response factor 4	0.03	Orthogroups_2024-Update
Glyma.08G216600	No alias	Integrase-type DNA-binding superfamily protein	0.01	Orthogroups_2024-Update
Glyma.13G122500	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.14G205600	No alias	cytokinin response factor 4	0.04	Orthogroups_2024-Update
Glyma.15G095600	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Glyma.20G195900	No alias	Integrase-type DNA-binding superfamily protein	0.01	Orthogroups_2024-Update
HORVU1Hr1G058940.3	No alias	transcription factor component *(HRE/RAP2.12) of...	0.01	Orthogroups_2024-Update
HORVU2Hr1G077180.2	No alias	subgroup ERF-III transcription factor	0.02	Orthogroups_2024-Update
HORVU5Hr1G080420.1	No alias	Unknown function	0.01	Orthogroups_2024-Update
HORVU7Hr1G099670.1	No alias	Unknown function	0.05	Orthogroups_2024-Update
LOC_Os01g58420	No alias	AP2 domain containing protein, expressed	0.01	Orthogroups_2024-Update
LOC_Os02g43820	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os02g43970	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os04g55520	No alias	AP2 domain containing protein, expressed	0.01	Orthogroups_2024-Update
LOC_Os05g41780	No alias	AP2 domain containing protein, expressed	0.01	Orthogroups_2024-Update
LOC_Os06g07030	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os08g31580	No alias	ethylene-responsive transcription factor, putative, expressed	0.01	Orthogroups_2024-Update
LOC_Os09g20350	No alias	ethylene-responsive transcription factor, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os12g41060	No alias	AP2 domain containing protein, expressed	0.01	Orthogroups_2024-Update
MA_16778g0010	No alias	(at5g05410 : 117.0) Encodes a transcription factor that...	0.01	Orthogroups_2024-Update
MA_3405g0010	No alias	(q40476\|erf1_tobac : 120.0) Ethylene-responsive...	0.02	Orthogroups_2024-Update
MA_4032g0010	No alias	(q9sxs8\|erf3_tobac : 85.1) Ethylene-responsive...	0.03	Orthogroups_2024-Update
MA_5805979g0010	No alias	(at4g17500 : 88.2) Encodes a member of the ERF (ethylene...	0.02	Orthogroups_2024-Update
MA_69434g0020	No alias	(q40479\|erf2_tobac : 84.0) Ethylene-responsive...	0.01	Orthogroups_2024-Update
Mp7g00860.1	No alias	transcription factor (DREB)	0.02	Orthogroups_2024-Update
Potri.001G079900	No alias	ethylene responsive element binding factor 1	0.02	Orthogroups_2024-Update
Potri.001G313500	No alias	Integrase-type DNA-binding superfamily protein	0.01	Orthogroups_2024-Update
Potri.002G172200	No alias	Integrase-type DNA-binding superfamily protein	0.01	Orthogroups_2024-Update
Potri.003G033000	No alias	Integrase-type DNA-binding superfamily protein	0.01	Orthogroups_2024-Update
Potri.003G081200	No alias	ethylene responsive element binding factor 1	0.02	Orthogroups_2024-Update
Potri.006G163400	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Potri.011G061800	No alias	Integrase-type DNA-binding superfamily protein	0.01	Orthogroups_2024-Update
Potri.012G032900	No alias	cytokinin response factor 4	0.01	Orthogroups_2024-Update
Potri.018G021900	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Pp1s121_50V6	No alias	ap2 erf domain-containing transcription factor	0.03	Orthogroups_2024-Update
Seita.1G323500.1	No alias	subgroup ERF-I transcription factor	0.03	Orthogroups_2024-Update
Seita.2G156200.1	No alias	subgroup ERF-IX transcription factor	0.01	Orthogroups_2024-Update
Seita.2G215500.1	No alias	subgroup ERF-VII transcription factor & transcription...	0.01	Orthogroups_2024-Update
Seita.5G141600.1	No alias	subgroup ERF-III transcription factor	0.04	Orthogroups_2024-Update
Seita.7G232100.1	No alias	subgroup ERF-VIII transcription factor	0.01	Orthogroups_2024-Update
Seita.9G516500.1	No alias	subgroup ERF-VII transcription factor	0.02	Orthogroups_2024-Update
Sobic.003G442100.1	No alias	subgroup ERF-III transcription factor	0.01	Orthogroups_2024-Update
Solyc02g088310	No alias	No description available	0.07	Orthogroups_2024-Update
Solyc03g026280	No alias	CBF	0.02	Orthogroups_2024-Update
Solyc03g093540	No alias	Ethylene-responsive transcription factor 5 (AHRD V3.3...	0.01	Orthogroups_2024-Update
Solyc05g051180	No alias	Ethylene-responsive transcription factor (AHRD V3.3 ***...	0.03	Orthogroups_2024-Update
Solyc05g052410	No alias	Dehydration responsive element binding protein (AHRD...	0.01	Orthogroups_2024-Update
Solyc08g078190	No alias	ethylene-responsive transcription factor	0.02	Orthogroups_2024-Update
Solyc12g009240	No alias	Ethylene-responsive transcription factor ERF017 (AHRD...	0.02	Orthogroups_2024-Update
Sopen00g003270	No alias	AP2 domain	0.04	Orthogroups_2024-Update
Sopen01g027380	No alias	AP2 domain	0.02	Orthogroups_2024-Update
Sopen11g007720	No alias	AP2 domain	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	16Dec
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005096	GTPase activator activity	IEP	Predicted GO
CC	GO:0005575	cellular_component	IEP	Predicted GO
CC	GO:0005634	nucleus	IEP	Predicted GO
BP	GO:0006812	cation transport	IEP	Predicted GO
MF	GO:0008047	enzyme activator activity	IEP	Predicted GO
MF	GO:0008324	cation transmembrane transporter activity	IEP	Predicted GO
BP	GO:0009719	response to endogenous stimulus	IEP	Predicted GO
BP	GO:0009725	response to hormone	IEP	Predicted GO
BP	GO:0010033	response to organic substance	IEP	Predicted GO
MF	GO:0015095	magnesium ion transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	Predicted GO
BP	GO:0015693	magnesium ion transport	IEP	Predicted GO
CC	GO:0016020	membrane	IEP	Predicted GO
MF	GO:0022890	inorganic cation transmembrane transporter activity	IEP	Predicted GO
BP	GO:0030001	metal ion transport	IEP	Predicted GO
MF	GO:0030695	GTPase regulator activity	IEP	Predicted GO
BP	GO:0042221	response to chemical	IEP	Predicted GO
MF	GO:0046873	metal ion transmembrane transporter activity	IEP	Predicted GO
MF	GO:0060589	nucleoside-triphosphatase regulator activity	IEP	Predicted GO
BP	GO:0070838	divalent metal ion transport	IEP	Predicted GO
BP	GO:0072511	divalent inorganic cation transport	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	72	122

External Links

No external refs found!

Brara.A03436.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation