1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. At1g76860

At1g76860


Description : LSM3B [Source:UniProtKB/TrEMBL;Acc:A0A178WQ75]


Gene families : OG_42_0005127 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005127_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At1g76860
Cluster HCCA clusters: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
Cre16.g662300 No alias Small nuclear ribonucleoprotein family protein 0.01 Orthogroups_2024-Update
MA_545800g0010 No alias (at1g21190 : 133.0) Small nuclear ribonucleoprotein... 0.03 Orthogroups_2024-Update
Mp8g11310.1 No alias component LSm3 of U6-associated LSm accessory... 0.02 Orthogroups_2024-Update
PSME_00053236-RA No alias (at1g21190 : 127.0) Small nuclear ribonucleoprotein... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005048 signal sequence binding IEP Predicted GO
CC GO:0005747 mitochondrial respiratory chain complex I IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
CC GO:0005956 protein kinase CK2 complex IEP Predicted GO
BP GO:0006621 protein retention in ER lumen IEP Predicted GO
BP GO:0007029 endoplasmic reticulum organization IEP Predicted GO
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP Predicted GO
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP Predicted GO
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Predicted GO
MF GO:0016854 racemase and epimerase activity IEP Predicted GO
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Predicted GO
MF GO:0016972 thiol oxidase activity IEP Predicted GO
CC GO:0030964 NADH dehydrogenase complex IEP Predicted GO
BP GO:0032507 maintenance of protein location in cell IEP Predicted GO
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Predicted GO
MF GO:0042277 peptide binding IEP Predicted GO
MF GO:0042393 histone binding IEP Predicted GO
BP GO:0045185 maintenance of protein location IEP Predicted GO
CC GO:0045271 respiratory chain complex I IEP Predicted GO
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP Predicted GO
MF GO:0046923 ER retention sequence binding IEP Predicted GO
BP GO:0051235 maintenance of location IEP Predicted GO
BP GO:0051651 maintenance of location in cell IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
BP GO:0072595 maintenance of protein localization in organelle IEP Predicted GO
CC GO:0098803 respiratory chain complex IEP Predicted GO
MF GO:0098809 nitrite reductase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001163 LSM_dom_euk/arc 16 92
No external refs found!