1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.A03482.1

Brara.A03482.1


Description : C2H2-type subclass ZAT transcription factor


Gene families : OG_42_0000046 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000046_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.A03482.1
Cluster HCAA Clusters: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
At4g35280 No alias DAZ2 [Source:UniProtKB/TrEMBL;Acc:A0A178UTT4] 0.03 Orthogroups_2024-Update
At5g56200 No alias C2H2 type zinc finger transcription factor family... 0.04 Orthogroups_2024-Update
Glyma.10G290200 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Orthogroups_2024-Update
PSME_00032797-RA No alias (at1g02040 : 96.7) C2H2-type zinc finger family protein;... 0.02 Orthogroups_2024-Update
Seita.2G378400.1 No alias C2H2-type subclass ZAT transcription factor 0.02 Orthogroups_2024-Update
Seita.8G247200.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.8G247300.1 No alias C2H2-type subclass ZAT transcription factor 0.03 Orthogroups_2024-Update
Sobic.001G035000.1 No alias C2H2-type subclass ZAT transcription factor 0.02 Orthogroups_2024-Update
Sobic.006G015600.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc03g115450 No alias LOW QUALITY:Zinc finger protein 1 (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc11g073060 No alias Zinc finger family protein (AHRD V3.3 *** B9HM54_POPTR) 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004743 pyruvate kinase activity IEP Predicted GO
MF GO:0030955 potassium ion binding IEP Predicted GO
MF GO:0031420 alkali metal ion binding IEP Predicted GO
BP GO:0048364 root development IEP Predicted GO
BP GO:0048367 shoot system development IEP Predicted GO
BP GO:0048731 system development IEP Predicted GO
BP GO:0051382 kinetochore assembly IEP Predicted GO
BP GO:0051383 kinetochore organization IEP Predicted GO
BP GO:0070925 organelle assembly IEP Predicted GO
BP GO:0099402 plant organ development IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!