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  5. Brara.A03620.1

Brara.A03620.1


Description : E3 ubiquitin ligase *(STUBL1/3)


Gene families : OG_42_0001976 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001976_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.A03620.1
Cluster HCAA Clusters: Cluster_402

Target Alias Description ECC score Gene Family Method Actions
Bradi2g58870 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Bradi4g34450 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0002682 regulation of immune system process IEP Predicted GO
BP GO:0002831 regulation of response to biotic stimulus IEP Predicted GO
MF GO:0005319 lipid transporter activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
CC GO:0005759 mitochondrial matrix IEP Predicted GO
BP GO:0006869 lipid transport IEP Predicted GO
MF GO:0008199 ferric iron binding IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
BP GO:0010112 regulation of systemic acquired resistance IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
BP GO:0031347 regulation of defense response IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
BP GO:0032101 regulation of response to external stimulus IEP Predicted GO
MF GO:0035091 phosphatidylinositol binding IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
BP GO:0043900 regulation of multi-organism process IEP Predicted GO
BP GO:0045088 regulation of innate immune response IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
BP GO:0050776 regulation of immune response IEP Predicted GO
BP GO:0061024 membrane organization IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
BP GO:0080134 regulation of response to stress IEP Predicted GO
BP GO:0120009 intermembrane lipid transfer IEP Predicted GO
MF GO:0120013 intermembrane lipid transfer activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 109 148
No external refs found!