Brara.A03699.1

Description : component *(eL22) of large ribosomal-subunit (LSU) proteome

Gene families : OG_42_0001702 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001702_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.A03699.1
Cluster	HCAA Clusters: Cluster_91

Target	Alias	Description	ECC score	Gene Family Method
270704	No alias	Ribosomal L22e protein family	0.12	Orthogroups_2024-Update
A4A49_00389	No alias	60s ribosomal protein l22-2	0.09	Orthogroups_2024-Update
A4A49_12264	No alias	60s ribosomal protein l22-2	0.03	Orthogroups_2024-Update
Bradi1g62830	No alias	Ribosomal L22e protein family	0.03	Orthogroups_2024-Update
Brara.C03109.1	No alias	component *(eL22) of large ribosomal-subunit (LSU) proteome	0.06	Orthogroups_2024-Update
Brara.E03358.1	No alias	component *(eL22) of large ribosomal-subunit (LSU) proteome	0.13	Orthogroups_2024-Update
Brara.F02844.1	No alias	component *(eL22) of large ribosomal-subunit (LSU) proteome	0.08	Orthogroups_2024-Update
Cre07.g357850	No alias	Ribosomal L22e protein family	0.1	Orthogroups_2024-Update
GRMZM2G063617	No alias	Ribosomal L22e protein family	0.06	Orthogroups_2024-Update
GRMZM2G134107	No alias	Ribosomal L22e protein family	0.03	Orthogroups_2024-Update
Glyma.02G017800	No alias	Ribosomal L22e protein family	0.07	Orthogroups_2024-Update
Glyma.03G235000	No alias	Ribosomal L22e protein family	0.03	Orthogroups_2024-Update
Glyma.10G018200	No alias	Ribosomal L22e protein family	0.06	Orthogroups_2024-Update
Glyma.10G151200	No alias	Ribosomal L22e protein family	0.05	Orthogroups_2024-Update
Glyma.19G232700	No alias	Ribosomal L22e protein family	0.05	Orthogroups_2024-Update
Glyma.20G237000	No alias	Ribosomal L22e protein family	0.07	Orthogroups_2024-Update
HORVU2Hr1G019160.1	No alias	component *(eL22) of large ribosomal-subunit (LSU) proteome	0.05	Orthogroups_2024-Update
HORVU7Hr1G080630.1	No alias	component *(eL22) of large ribosomal-subunit (LSU) proteome	0.06	Orthogroups_2024-Update
Kfl00104_0130	kfl00104_0130_v1.1	(at5g27770 : 144.0) Ribosomal L22e protein family;...	0.04	Orthogroups_2024-Update
LOC_Os07g47710	No alias	60S ribosomal protein L22-2, putative, expressed	0.04	Orthogroups_2024-Update
PSME_00024504-RA	No alias	(at3g05560 : 145.0) Ribosomal L22e protein family;...	0.06	Orthogroups_2024-Update
Potri.005G024400	No alias	Ribosomal L22e protein family	0.04	Orthogroups_2024-Update
Potri.010G012700	No alias	Ribosomal L22e protein family	0.08	Orthogroups_2024-Update
Potri.013G015300	No alias	Ribosomal L22e protein family	0.04	Orthogroups_2024-Update
Potri.014G128800	No alias	Ribosomal L22e protein family	0.05	Orthogroups_2024-Update
Pp1s283_20V6	No alias	60s ribosomal protein	0.05	Orthogroups_2024-Update
Pp1s457_15V6	No alias	60s ribosomal protein	0.12	Orthogroups_2024-Update
Seita.2G429500.1	No alias	component *(eL22) of large ribosomal-subunit (LSU) proteome	0.1	Orthogroups_2024-Update
Seita.9G409100.1	No alias	component *(eL22) of large ribosomal-subunit (LSU) proteome	0.1	Orthogroups_2024-Update
Sobic.001G376600.1	No alias	component *(eL22) of large ribosomal-subunit (LSU) proteome	0.09	Orthogroups_2024-Update
Sobic.002G414700.1	No alias	component *(eL22) of large ribosomal-subunit (LSU) proteome	0.12	Orthogroups_2024-Update
Solyc01g099830	No alias	60S ribosomal protein L22-2 (AHRD V3.3 *** W9QTY3_9ROSA)	0.1	Orthogroups_2024-Update
Solyc09g075150	No alias	60S ribosomal protein L22-2 (AHRD V3.3 *** RL222_ARATH)	0.07	Orthogroups_2024-Update
Solyc09g075160	No alias	60S ribosomal protein L22-2 (AHRD V3.3 *** RL222_ARATH)	0.04	Orthogroups_2024-Update
Sopen01g043340	No alias	Ribosomal L22e protein family	0.1	Orthogroups_2024-Update
Sopen09g029970	No alias	Ribosomal L22e protein family	0.08	Orthogroups_2024-Update
Sopen09g029980	No alias	Ribosomal L22e protein family	0.06	Orthogroups_2024-Update
evm.model.contig_2121.19	No alias	(at3g05560 : 87.0) Ribosomal L22e protein family;...	0.1	Orthogroups_2024-Update
evm.model.tig00001206.7	No alias	(at3g05560 : 112.0) Ribosomal L22e protein family;...	0.07	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	16Dec
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	16Dec
BP	GO:0006412	translation	IEA	16Dec
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003883	CTP synthase activity	IEP	Predicted GO
MF	GO:0004455	ketol-acid reductoisomerase activity	IEP	Predicted GO
MF	GO:0004743	pyruvate kinase activity	IEP	Predicted GO
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	Predicted GO
MF	GO:0004814	arginine-tRNA ligase activity	IEP	Predicted GO
CC	GO:0005737	cytoplasm	IEP	Predicted GO
BP	GO:0006082	organic acid metabolic process	IEP	Predicted GO
BP	GO:0006090	pyruvate metabolic process	IEP	Predicted GO
BP	GO:0006096	glycolytic process	IEP	Predicted GO
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Predicted GO
BP	GO:0006165	nucleoside diphosphate phosphorylation	IEP	Predicted GO
BP	GO:0006220	pyrimidine nucleotide metabolic process	IEP	Predicted GO
BP	GO:0006221	pyrimidine nucleotide biosynthetic process	IEP	Predicted GO
BP	GO:0006399	tRNA metabolic process	IEP	Predicted GO
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	Predicted GO
BP	GO:0006420	arginyl-tRNA aminoacylation	IEP	Predicted GO
BP	GO:0006520	cellular amino acid metabolic process	IEP	Predicted GO
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	Predicted GO
BP	GO:0006733	oxidoreduction coenzyme metabolic process	IEP	Predicted GO
BP	GO:0006753	nucleoside phosphate metabolic process	IEP	Predicted GO
BP	GO:0006757	ATP generation from ADP	IEP	Predicted GO
BP	GO:0009081	branched-chain amino acid metabolic process	IEP	Predicted GO
BP	GO:0009082	branched-chain amino acid biosynthetic process	IEP	Predicted GO
BP	GO:0009117	nucleotide metabolic process	IEP	Predicted GO
BP	GO:0009132	nucleoside diphosphate metabolic process	IEP	Predicted GO
BP	GO:0009135	purine nucleoside diphosphate metabolic process	IEP	Predicted GO
BP	GO:0009165	nucleotide biosynthetic process	IEP	Predicted GO
BP	GO:0009166	nucleotide catabolic process	IEP	Predicted GO
BP	GO:0009179	purine ribonucleoside diphosphate metabolic process	IEP	Predicted GO
BP	GO:0009185	ribonucleoside diphosphate metabolic process	IEP	Predicted GO
BP	GO:0016053	organic acid biosynthetic process	IEP	Predicted GO
BP	GO:0016070	RNA metabolic process	IEP	Predicted GO
MF	GO:0016874	ligase activity	IEP	Predicted GO
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	Predicted GO
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	Predicted GO
BP	GO:0018130	heterocycle biosynthetic process	IEP	Predicted GO
BP	GO:0019359	nicotinamide nucleotide biosynthetic process	IEP	Predicted GO
BP	GO:0019362	pyridine nucleotide metabolic process	IEP	Predicted GO
BP	GO:0019363	pyridine nucleotide biosynthetic process	IEP	Predicted GO
BP	GO:0019438	aromatic compound biosynthetic process	IEP	Predicted GO
BP	GO:0019637	organophosphate metabolic process	IEP	Predicted GO
BP	GO:0019752	carboxylic acid metabolic process	IEP	Predicted GO
MF	GO:0030955	potassium ion binding	IEP	Predicted GO
MF	GO:0031420	alkali metal ion binding	IEP	Predicted GO
BP	GO:0034404	nucleobase-containing small molecule biosynthetic process	IEP	Predicted GO
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	Predicted GO
BP	GO:0034660	ncRNA metabolic process	IEP	Predicted GO
BP	GO:0042866	pyruvate biosynthetic process	IEP	Predicted GO
BP	GO:0043038	amino acid activation	IEP	Predicted GO
BP	GO:0043039	tRNA aminoacylation	IEP	Predicted GO
BP	GO:0043436	oxoacid metabolic process	IEP	Predicted GO
BP	GO:0044281	small molecule metabolic process	IEP	Predicted GO
BP	GO:0044283	small molecule biosynthetic process	IEP	Predicted GO
BP	GO:0046031	ADP metabolic process	IEP	Predicted GO
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	Predicted GO
BP	GO:0046483	heterocycle metabolic process	IEP	Predicted GO
BP	GO:0046496	nicotinamide nucleotide metabolic process	IEP	Predicted GO
BP	GO:0046939	nucleotide phosphorylation	IEP	Predicted GO
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	Predicted GO
BP	GO:0072524	pyridine-containing compound metabolic process	IEP	Predicted GO
BP	GO:0072525	pyridine-containing compound biosynthetic process	IEP	Predicted GO
BP	GO:0072527	pyrimidine-containing compound metabolic process	IEP	Predicted GO
BP	GO:0072528	pyrimidine-containing compound biosynthetic process	IEP	Predicted GO
BP	GO:0090407	organophosphate biosynthetic process	IEP	Predicted GO
MF	GO:0140098	catalytic activity, acting on RNA	IEP	Predicted GO
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	Predicted GO
BP	GO:1901292	nucleoside phosphate catabolic process	IEP	Predicted GO
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	Predicted GO
BP	GO:1901360	organic cyclic compound metabolic process	IEP	Predicted GO
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002671	Ribosomal_L22e	14	122

External Links

No external refs found!

Brara.A03699.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation