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  5. Brara.A03765.1

Brara.A03765.1


Description : EC_6.1 ligase forming carbon-oxygen bond & tryptophan-tRNA ligase


Gene families : OG_42_0006093 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006093_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.A03765.1
Cluster HCAA Clusters: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
Bradi4g05570 No alias Nucleotidylyl transferase superfamily protein 0.03 Orthogroups_2024-Update
Cre12.g522350 No alias Nucleotidylyl transferase superfamily protein 0.01 Orthogroups_2024-Update
Solyc08g074410 No alias tRNA synthetase (AHRD V3.3 *** C1N232_MICPC) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA 16Dec
MF GO:0004812 aminoacyl-tRNA ligase activity IEA 16Dec
MF GO:0005524 ATP binding IEA 16Dec
BP GO:0006418 tRNA aminoacylation for protein translation IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP Predicted GO
MF GO:0004000 adenosine deaminase activity IEP Predicted GO
BP GO:0006914 autophagy IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predicted GO
MF GO:0019239 deaminase activity IEP Predicted GO
CC GO:0031248 protein acetyltransferase complex IEP Predicted GO
BP GO:0061919 process utilizing autophagic mechanism IEP Predicted GO
CC GO:0070461 SAGA-type complex IEP Predicted GO
CC GO:1902493 acetyltransferase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002305 aa-tRNA-synth_Ic 87 370
No external refs found!