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Description : RING-H2-class ATL-subclass E3 ubiquitin ligase
Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa: Brara.A03822.1 | |
| Cluster | HCAA Clusters: Cluster_221 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| A4A49_20151 | No alias | putative ring-h2 finger protein atl61 | 0.03 | Orthogroups_2024-Update | |
| Bradi5g18837 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Brara.C00776.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Brara.H01648.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Brara.H02311.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G004480 | No alias | RING/U-box superfamily protein | 0.04 | Orthogroups_2024-Update | |
| GRMZM2G150832 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.13G092100 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.18G060500 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| HORVU6Hr1G077610.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| MA_94359g0010 | No alias | (at4g35480 : 121.0) Encodes a putative RING-H2 finger... | 0.03 | Orthogroups_2024-Update | |
| Pp1s213_71V6 | No alias | zinc finger | 0.02 | Orthogroups_2024-Update | |
| Sobic.003G299800.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Sobic.004G109600.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| Sobic.010G071000.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.04 | Orthogroups_2024-Update | |
| Solyc01g066430 | No alias | RING/U-box superfamily protein (AHRD V3.3 *** AT2G47560.1) | 0.03 | Orthogroups_2024-Update | |
| Solyc01g081040 | No alias | RING/U-box superfamily protein, putative (AHRD V3.3 ***... | 0.04 | Orthogroups_2024-Update | |
| Solyc03g112340 | No alias | RING/U-box superfamily protein (AHRD V3.3 *** AT3G05200.1) | 0.03 | Orthogroups_2024-Update | |
| Solyc12g087840 | No alias | RING/U-box superfamily protein, putative (AHRD V3.3 ***... | 0.03 | Orthogroups_2024-Update | |
| Sopen02g016820 | No alias | Ring finger domain | 0.03 | Orthogroups_2024-Update | |
| evm.model.contig_2102.17 | No alias | no hits & (original description: no original description) | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004427 | inorganic diphosphatase activity | IEP | Predicted GO |
| MF | GO:0004435 | phosphatidylinositol phospholipase C activity | IEP | Predicted GO |
| MF | GO:0004620 | phospholipase activity | IEP | Predicted GO |
| MF | GO:0004629 | phospholipase C activity | IEP | Predicted GO |
| BP | GO:0007034 | vacuolar transport | IEP | Predicted GO |
| MF | GO:0016298 | lipase activity | IEP | Predicted GO |
| CC | GO:0016459 | myosin complex | IEP | Predicted GO |
| MF | GO:0042393 | histone binding | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 147 | 190 |
| No external refs found! |