1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.A03900.1

Brara.A03900.1


Description : Unknown function


Gene families : OG_42_0000195 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000195_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.A03900.1
Cluster HCAA Clusters: Cluster_400

Target Alias Description ECC score Gene Family Method Actions
At3g02440 No alias TRICHOME BIREFRINGENCE-LIKE 20... 0.04 Orthogroups_2024-Update
GRMZM2G122073 No alias TRICHOME BIREFRINGENCE-LIKE 27 0.02 Orthogroups_2024-Update
Glyma.13G049200 No alias TRICHOME BIREFRINGENCE-LIKE 19 0.03 Orthogroups_2024-Update
Pp1s326_28V6 No alias F6F3.23; expressed protein [Arabidopsis thaliana] 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016740 transferase activity IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0004664 prephenate dehydratase activity IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0006558 L-phenylalanine metabolic process IEP Predicted GO
MF GO:0008061 chitin binding IEP Predicted GO
BP GO:0009072 aromatic amino acid family metabolic process IEP Predicted GO
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Predicted GO
BP GO:0009094 L-phenylalanine biosynthetic process IEP Predicted GO
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
BP GO:0017144 drug metabolic process IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Predicted GO
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR025846 PMR5_N_dom 134 186
IPR026057 PC-Esterase 187 476
No external refs found!