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  5. Brara.A03909.1

Brara.A03909.1


Description : MYB class-R2R3 subgroup-8 transcription factor


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.A03909.1
Cluster HCAA Clusters: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
39499 No alias myb domain protein 13 0.03 Orthogroups_2024-Update
A4A49_08581 No alias transcription factor myb36 0.03 Orthogroups_2024-Update
A4A49_08715 No alias myb-related protein pp2 0.02 Orthogroups_2024-Update
A4A49_19188 No alias transcription factor laf1 0.03 Orthogroups_2024-Update
A4A49_38619 No alias transcription factor myb86 0.03 Orthogroups_2024-Update
At1g09540 No alias MYB61 [Source:UniProtKB/TrEMBL;Acc:A0A178WLE4] 0.03 Orthogroups_2024-Update
At2g47190 No alias ATMYB2 [Source:UniProtKB/TrEMBL;Acc:Q39028] 0.03 Orthogroups_2024-Update
At5g40330 No alias Transcription factor MYB23... 0.03 Orthogroups_2024-Update
At5g57620 No alias Transcription factor MYB36... 0.04 Orthogroups_2024-Update
At5g62470 No alias Transcription factor MYB96... 0.03 Orthogroups_2024-Update
Bradi2g05740 No alias myb domain protein 37 0.05 Orthogroups_2024-Update
Bradi3g17165 No alias myb domain protein 103 0.02 Orthogroups_2024-Update
Bradi5g20130 No alias myb domain protein 63 0.03 Orthogroups_2024-Update
Brara.F01643.1 No alias MYB class-R2R3 subgroup-16 transcription factor &... 0.03 Orthogroups_2024-Update
Brara.F03146.1 No alias transcriptional regulator *(TDF1) 0.03 Orthogroups_2024-Update
GRMZM2G084799 No alias myb domain protein 12 0.02 Orthogroups_2024-Update
GRMZM2G117244 No alias myb domain protein 68 0.03 Orthogroups_2024-Update
GRMZM2G419239 No alias myb domain protein 7 0.02 Orthogroups_2024-Update
Glyma.03G183900 No alias myb domain protein 68 0.04 Orthogroups_2024-Update
Glyma.05G234600 No alias myb domain protein 116 0.03 Orthogroups_2024-Update
Glyma.06G193600 No alias myb domain protein 94 0.02 Orthogroups_2024-Update
Glyma.08G042100 No alias myb domain protein 62 0.03 Orthogroups_2024-Update
Glyma.12G237500 No alias myb domain protein 83 0.03 Orthogroups_2024-Update
Glyma.13G339900 No alias myb domain protein 83 0.04 Orthogroups_2024-Update
Glyma.15G041100 No alias myb domain protein 48 0.04 Orthogroups_2024-Update
Glyma.15G259400 No alias myb domain protein 63 0.04 Orthogroups_2024-Update
Glyma.15G264000 No alias myb domain protein 67 0.02 Orthogroups_2024-Update
Glyma.17G099800 No alias myb domain protein 94 0.03 Orthogroups_2024-Update
HORVU0Hr1G005100.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
HORVU1Hr1G051980.2 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU6Hr1G060610.3 No alias MYB class-R2R3 subgroup-16 transcription factor &... 0.03 Orthogroups_2024-Update
HORVU7Hr1G057410.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.03 Orthogroups_2024-Update
LOC_Os01g03720 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os01g50720 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os03g26130 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g33150 No alias MYB family transcription factor, putative, expressed 0.04 Orthogroups_2024-Update
LOC_Os08g37970 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os09g36250 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g37970 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
MA_10048467g0010 No alias (at5g35550 : 171.0) TT2 encodes a R2R3 MYB domain... 0.02 Orthogroups_2024-Update
MA_10435612g0010 No alias (at5g15310 : 300.0) Member of the R2R3 factor gene... 0.02 Orthogroups_2024-Update
MA_2026g0010 No alias (p20025|myb38_maize : 264.0) Myb-related protein Zm38 -... 0.03 Orthogroups_2024-Update
MA_246142g0010 No alias (at4g38620 : 256.0) Encodes a R2R3 MYB protein which is... 0.04 Orthogroups_2024-Update
MA_355131g0010 No alias (at3g28910 : 186.0) transcription factor myb homologue;... 0.04 Orthogroups_2024-Update
MA_3665g0010 No alias (at5g26660 : 238.0) a MYB gene encodes a transcriptional... 0.04 Orthogroups_2024-Update
MA_37256g0010 No alias (at4g01680 : 233.0) Encodes a putative transcription... 0.03 Orthogroups_2024-Update
MA_93127g0010 No alias (at4g38620 : 220.0) Encodes a R2R3 MYB protein which is... 0.02 Orthogroups_2024-Update
PSME_00001482-RA No alias (at4g22680 : 248.0) Encodes a putative transcription... 0.03 Orthogroups_2024-Update
PSME_00014669-RA No alias (at1g22640 : 190.0) MYB-type transcription factor (MYB3)... 0.03 Orthogroups_2024-Update
PSME_00021444-RA No alias (at1g22640 : 170.0) MYB-type transcription factor (MYB3)... 0.03 Orthogroups_2024-Update
PSME_00021445-RA No alias (at1g22640 : 169.0) MYB-type transcription factor (MYB3)... 0.04 Orthogroups_2024-Update
PSME_00023733-RA No alias (at1g22640 : 175.0) MYB-type transcription factor (MYB3)... 0.03 Orthogroups_2024-Update
PSME_00031159-RA No alias (at4g38620 : 228.0) Encodes a R2R3 MYB protein which is... 0.03 Orthogroups_2024-Update
PSME_00031160-RA No alias (at4g38620 : 228.0) Encodes a R2R3 MYB protein which is... 0.04 Orthogroups_2024-Update
PSME_00035153-RA No alias (at3g02940 : 237.0) Encodes a putative transcription... 0.03 Orthogroups_2024-Update
PSME_00036270-RA No alias (at5g65790 : 241.0) Encodes a putative MYB transcription... 0.03 Orthogroups_2024-Update
PSME_00041970-RA No alias (at1g22640 : 188.0) MYB-type transcription factor (MYB3)... 0.02 Orthogroups_2024-Update
PSME_00043973-RA No alias (at1g22640 : 191.0) MYB-type transcription factor (MYB3)... 0.02 Orthogroups_2024-Update
PSME_00050915-RA No alias (at1g74650 : 283.0) Member of the R2R3 factor gene... 0.04 Orthogroups_2024-Update
PSME_00052652-RA No alias (p20025|myb38_maize : 250.0) Myb-related protein Zm38 -... 0.03 Orthogroups_2024-Update
PSME_00052777-RA No alias (at4g38620 : 269.0) Encodes a R2R3 MYB protein which is... 0.02 Orthogroups_2024-Update
PSME_00053285-RA No alias (at4g38620 : 263.0) Encodes a R2R3 MYB protein which is... 0.03 Orthogroups_2024-Update
Potri.001G139900 No alias myb domain protein 9 0.04 Orthogroups_2024-Update
Potri.001G267300 No alias myb domain protein 83 0.03 Orthogroups_2024-Update
Potri.003G094200 No alias myb domain protein 9 0.03 Orthogroups_2024-Update
Potri.012G127700 No alias myb domain protein 42 0.03 Orthogroups_2024-Update
Potri.015G046200 No alias myb domain protein 116 0.03 Orthogroups_2024-Update
Potri.017G086300 No alias myb domain protein 16 0.03 Orthogroups_2024-Update
Pp1s204_13V6 No alias MDA7.17; myb family transcription factor [Arabidopsis thaliana] 0.03 Orthogroups_2024-Update
Pp1s277_14V6 No alias myb55 (myb domain protein 55) dna binding transcription factor 0.02 Orthogroups_2024-Update
Pp1s2_60V6 No alias myb transcription factor 0.02 Orthogroups_2024-Update
Seita.2G286400.1 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
Seita.5G135700.1 No alias MYB class-R2R3 subgroup-14 transcription factor 0.03 Orthogroups_2024-Update
Seita.5G290600.1 No alias transcriptional regulator *(MYB26) & MYB class-R2R3... 0.04 Orthogroups_2024-Update
Sobic.005G155900.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.03 Orthogroups_2024-Update
Sobic.007G177100.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.02 Orthogroups_2024-Update
Solyc06g053610 No alias R2R3MYB transcription factor 14 0.03 Orthogroups_2024-Update
Solyc11g072060 No alias MYB-related transcription factor (AHRD V3.3 *** A0A059PSR6_SALMI) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004190 aspartic-type endopeptidase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
CC GO:0005669 transcription factor TFIID complex IEP Predicted GO
BP GO:0005996 monosaccharide metabolic process IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
MF GO:0008061 chitin binding IEP Predicted GO
BP GO:0009605 response to external stimulus IEP Predicted GO
BP GO:0009607 response to biotic stimulus IEP Predicted GO
BP GO:0009617 response to bacterium IEP Predicted GO
BP GO:0009620 response to fungus IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
BP GO:0019321 pentose metabolic process IEP Predicted GO
BP GO:0019566 arabinose metabolic process IEP Predicted GO
MF GO:0035673 oligopeptide transmembrane transporter activity IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0042742 defense response to bacterium IEP Predicted GO
MF GO:0042887 amide transmembrane transporter activity IEP Predicted GO
BP GO:0043207 response to external biotic stimulus IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
BP GO:0046373 L-arabinose metabolic process IEP Predicted GO
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP Predicted GO
BP GO:0050832 defense response to fungus IEP Predicted GO
BP GO:0051704 multi-organism process IEP Predicted GO
BP GO:0051707 response to other organism IEP Predicted GO
MF GO:0070001 aspartic-type peptidase activity IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
BP GO:0098542 defense response to other organism IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
MF GO:1904680 peptide transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 67 112
IPR001005 SANT/Myb 14 61
No external refs found!