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  5. Brara.B00081.1

Brara.B00081.1


Description : Fasciclin-type arabinogalactan protein


Gene families : OG_42_0000509 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000509_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.B00081.1
Cluster HCAA Clusters: Cluster_190

Target Alias Description ECC score Gene Family Method Actions
A4A49_07465 No alias fasciclin-like arabinogalactan protein 11 0.03 Orthogroups_2024-Update
A4A49_07466 No alias fasciclin-like arabinogalactan protein 11 0.03 Orthogroups_2024-Update
A4A49_28632 No alias fasciclin-like arabinogalactan protein 12 0.04 Orthogroups_2024-Update
At1g03870 No alias At1g03870 [Source:UniProtKB/TrEMBL;Acc:B3LF88] 0.03 Orthogroups_2024-Update
At5g60490 No alias Fasciclin-like arabinogalactan protein 12... 0.03 Orthogroups_2024-Update
Bradi2g00220 No alias FASCICLIN-like arabinogalactan-protein 11 0.03 Orthogroups_2024-Update
Bradi2g16560 No alias FASCICLIN-like arabinogalactan protein 13 precursor 0.03 Orthogroups_2024-Update
Bradi2g16570 No alias FASCICLIN-like arabinogalactan-protein 11 0.02 Orthogroups_2024-Update
Brara.C01034.1 No alias Fasciclin-type arabinogalactan protein 0.03 Orthogroups_2024-Update
Glyma.05G162000 No alias FASCICLIN-like arabinogalactan-protein 11 0.04 Orthogroups_2024-Update
LOC_Os01g47780 No alias fasciclin domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_309953g0010 No alias (at2g04780 : 108.0) fasciclin-like... 0.03 Orthogroups_2024-Update
Potri.001G320800 No alias FASCICLIN-like arabinogalactan-protein 11 0.03 Orthogroups_2024-Update
Potri.006G129200 No alias FASCICLIN-like arabinogalactan-protein 11 0.06 Orthogroups_2024-Update
Potri.015G129400 No alias FASCICLIN-like arabinogalactan-protein 11 0.05 Orthogroups_2024-Update
Potri.016G088700 No alias FASCICLIN-like arabinogalactan-protein 11 0.06 Orthogroups_2024-Update
Potri.019G093300 No alias FASCICLIN-like arabinogalactan 6 0.03 Orthogroups_2024-Update
Seita.3G146700.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.3G146800.1 No alias Fasciclin-type arabinogalactan protein 0.05 Orthogroups_2024-Update
Sobic.003G062000.1 No alias Fasciclin-type arabinogalactan protein 0.03 Orthogroups_2024-Update
Solyc09g007660 No alias Fasciclin-like arabinogalactan protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0006536 glutamate metabolic process IEP Predicted GO
BP GO:0006537 glutamate biosynthetic process IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
MF GO:0008509 anion transmembrane transporter activity IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
MF GO:0015930 glutamate synthase activity IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
MF GO:0030234 enzyme regulator activity IEP Predicted GO
BP GO:0043648 dicarboxylic acid metabolic process IEP Predicted GO
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000782 FAS1_domain 46 181
No external refs found!