Brara.B00098.1

Description : E3 ubiquitin ligase

Gene families : OG_42_0003498 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003498_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.B00098.1
Cluster	HCAA Clusters: Cluster_126

Target	Alias	Description	ECC score	Gene Family Method	Actions
Bradi3g32540	No alias	Transducin/WD40 repeat-like superfamily protein	0.04	Orthogroups_2024-Update
Sobic.001G538500.1	No alias	component *(RPA2) of RPA presynaptic filament assembly...	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0003873	6-phosphofructo-2-kinase activity	IEP	Predicted GO
MF	GO:0005515	protein binding	IEP	Predicted GO
BP	GO:0005996	monosaccharide metabolic process	IEP	Predicted GO
BP	GO:0006000	fructose metabolic process	IEP	Predicted GO
BP	GO:0006366	transcription by RNA polymerase II	IEP	Predicted GO
MF	GO:0008134	transcription factor binding	IEP	Predicted GO
MF	GO:0008443	phosphofructokinase activity	IEP	Predicted GO
MF	GO:0008483	transaminase activity	IEP	Predicted GO
MF	GO:0016769	transferase activity, transferring nitrogenous groups	IEP	Predicted GO
MF	GO:0017025	TBP-class protein binding	IEP	Predicted GO
MF	GO:0019200	carbohydrate kinase activity	IEP	Predicted GO
BP	GO:0019318	hexose metabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001841	Znf_RING	113	160

External Links

No external refs found!