Brara.B00141.1

Description : NAC-type transcription factor

Gene families : OG_42_0000017 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000017_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.B00141.1
Cluster	HCAA Clusters: Cluster_235

Target	Alias	Description	ECC score	Gene Family Method
A4A49_22044	No alias	nac domain-containing protein 100	0.03	Orthogroups_2024-Update
A4A49_24845	No alias	nac domain-containing protein 78	0.04	Orthogroups_2024-Update
At1g71930	No alias	NAC domain-containing protein 30...	0.03	Orthogroups_2024-Update
At1g79580	No alias	Protein SOMBRERO [Source:UniProtKB/Swiss-Prot;Acc:Q9MA17]	0.03	Orthogroups_2024-Update
At2g24430	No alias	NAC domain containing protein 38...	0.06	Orthogroups_2024-Update
At3g17730	No alias	NAC domain containing protein 57...	0.03	Orthogroups_2024-Update
Bradi1g17440	No alias	Arabidopsis NAC domain containing protein 87	0.02	Orthogroups_2024-Update
Bradi3g13727	No alias	NAC (No Apical Meristem) domain transcriptional...	0.04	Orthogroups_2024-Update
Brara.A03837.1	No alias	NAC-type transcription factor	0.05	Orthogroups_2024-Update
Brara.C00813.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Brara.D01471.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Brara.G00213.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
GRMZM2G406204	No alias	NAC domain containing protein 28	0.04	Orthogroups_2024-Update
Glyma.04G167200	No alias	NAC domain containing protein 100	0.04	Orthogroups_2024-Update
Glyma.09G167400	No alias	NAC domain containing protein 57	0.04	Orthogroups_2024-Update
Glyma.16G042900	No alias	Arabidopsis NAC domain containing protein 87	0.03	Orthogroups_2024-Update
LOC_Os06g01230	No alias	no apical meristem protein, putative, expressed	0.02	Orthogroups_2024-Update
MA_109677g0010	No alias	(at5g61430 : 282.0) NAC domain containing protein 100...	0.05	Orthogroups_2024-Update
Potri.001G448400	No alias	NAC (No Apical Meristem) domain transcriptional...	0.03	Orthogroups_2024-Update
Potri.003G089800	No alias	NAC domain containing protein 96	0.03	Orthogroups_2024-Update
Potri.005G058900	No alias	NAC domain containing protein 82	0.03	Orthogroups_2024-Update
Potri.011G149300	No alias	NAC 014	0.03	Orthogroups_2024-Update
Potri.014G104800	No alias	NAC (No Apical Meristem) domain transcriptional...	0.03	Orthogroups_2024-Update
Potri.017G139500	No alias	NAC domain containing protein 28	0.03	Orthogroups_2024-Update
Seita.9G417900.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Seita.9G564000.1	No alias	NAC-type transcription factor	0.02	Orthogroups_2024-Update
Sobic.001G386000.1	No alias	NAC-type transcription factor	0.04	Orthogroups_2024-Update
Sobic.004G191700.1	No alias	NAC-type transcription factor	0.04	Orthogroups_2024-Update
Sobic.010G155000.2	No alias	NAC-type transcription factor	0.02	Orthogroups_2024-Update
Solyc08g008660	No alias	NAC domain-containing protein, putative (AHRD V3.3 ***...	0.03	Orthogroups_2024-Update
Sopen06g029400	No alias	No apical meristem (NAM) protein	0.05	Orthogroups_2024-Update
Sopen08g025690	No alias	No apical meristem (NAM) protein	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	16Dec
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000786	nucleosome	IEP	Predicted GO
BP	GO:0006334	nucleosome assembly	IEP	Predicted GO
CC	GO:0016459	myosin complex	IEP	Predicted GO
CC	GO:0032993	protein-DNA complex	IEP	Predicted GO
BP	GO:0034728	nucleosome organization	IEP	Predicted GO
CC	GO:0044815	DNA packaging complex	IEP	Predicted GO
BP	GO:0065004	protein-DNA complex assembly	IEP	Predicted GO
BP	GO:0071824	protein-DNA complex subunit organization	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003441	NAC-dom	11	136

External Links

No external refs found!

Brara.B00141.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation